Protein–RNA interactions for Protein: Q96FN4

CPNE2, Copine-2, humanhuman

Predicted RBP Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE2Q96FN4 CLDN19-202ENST00000372539 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 AC092127.1-201ENST00000567093 3455 ntBASIC13.62□□□□□ -0.23
CPNE2Q96FN4 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 KIAA0319-201ENST00000378214 6802 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 GSN-206ENST00000394353 2311 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 ASTN2-206ENST00000361477 4001 ntTSL 5 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 TEX30-206ENST00000376032 1165 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 AL590627.1-203ENST00000421194 1026 ntBASIC13.62□□□□□ -0.23
CPNE2Q96FN4 EEF1DP4-201ENST00000446006 880 ntBASIC13.62□□□□□ -0.23
CPNE2Q96FN4 PHKG1P2-201ENST00000457537 863 ntBASIC13.62□□□□□ -0.23
CPNE2Q96FN4 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 AC034213.1-201ENST00000507681 806 ntTSL 3 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 GATB-205ENST00000508611 605 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 RNF34-208ENST00000555076 593 ntTSL 3 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 AL138918.1-201ENST00000568306 659 ntBASIC13.62□□□□□ -0.23
CPNE2Q96FN4 IGHV3OR16-6-201ENST00000568775 360 ntBASIC13.62□□□□□ -0.23
CPNE2Q96FN4 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 AL513190.1-201ENST00000621254 727 ntBASIC13.62□□□□□ -0.23
CPNE2Q96FN4 CKMT1B-215ENST00000627381 1074 ntTSL 5 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 RERE-204ENST00000400908 5790 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 AGRN-210ENST00000620552 7394 ntTSL 5 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 GRAMD4-202ENST00000406902 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 DKFZP434A062-201ENST00000573103 5021 ntBASIC13.62□□□□□ -0.23
CPNE2Q96FN4 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 AC127383.1-201ENST00000444697 1800 ntBASIC13.62□□□□□ -0.23
CPNE2Q96FN4 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 TRIM41-201ENST00000315073 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 ZC3HAV1-203ENST00000464606 4776 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
CPNE2Q96FN4 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 AC005899.8-201ENST00000625127 3153 ntTSL 5 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 SNHG18-201ENST00000508179 1799 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 RASAL2-AS1-202ENST00000421505 2329 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 LINC00029-202ENST00000414668 1117 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 RPL18-209ENST00000550645 463 ntTSL 5 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 RPL18-214ENST00000552588 559 ntTSL 3 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 AC026120.1-201ENST00000611536 926 ntBASIC13.61□□□□□ -0.23
CPNE2Q96FN4 AC055717.3-201ENST00000622967 595 ntBASIC13.61□□□□□ -0.23
CPNE2Q96FN4 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 COLCA2-206ENST00000638573 1080 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 UBQLN1-202ENST00000376395 4118 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 OPA1-205ENST00000361908 6439 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
CPNE2Q96FN4 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 60.7 ms