Protein–RNA interactions for Protein: Q96BQ3

TRIM43, Tripartite motif-containing protein 43, humanhuman

Predicted RBP Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM43Q96BQ3 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 TOMM7-201ENST00000358435 778 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 AK1-202ENST00000373156 757 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 PFN2-202ENST00000423691 911 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 IKBKB-212ENST00000519735 1166 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 PTK2-225ENST00000520892 571 ntTSL 4 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 AC132192.2-201ENST00000596206 1147 ntBASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 MIR6842-201ENST00000612539 65 ntBASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 AL136301.1-201ENST00000615830 422 ntBASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 AL136295.7-201ENST00000619226 1200 ntBASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 ZDHHC4-204ENST00000396709 1485 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 TDRKH-204ENST00000368825 2651 ntTSL 2 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 TMEM198B-201ENST00000471276 1958 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
TRIM43Q96BQ3 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 TMEM14B-202ENST00000379542 975 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 DNAJB1P1-201ENST00000429417 1024 ntBASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 AC090857.1-201ENST00000527400 390 ntBASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 AC009065.3-201ENST00000562027 627 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 RANGRF-205ENST00000580434 749 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 SRSF3-208ENST00000620941 869 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 YRDCP1-201ENST00000621419 643 ntBASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 TOMM7-207ENST00000621567 241 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 RNF167-211ENST00000575111 1757 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 AC055811.4-201ENST00000624039 1754 ntBASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 TMEM106A-202ENST00000541594 1330 ntTSL 2 BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 AC008770.3-201ENST00000590798 1562 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
TRIM43Q96BQ3 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 TBC1D3J-201ENST00000620719 1426 ntBASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 ETFA-203ENST00000557943 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 ACYP1-201ENST00000238618 627 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 PRKRA-211ENST00000487082 1211 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 TMEM218-205ENST00000527271 706 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 AC011466.3-201ENST00000596563 852 ntTSL 2 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 AL603764.1-201ENST00000636452 321 ntBASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 ZNF211-201ENST00000240731 2440 ntAPPRIS P4 TSL 2 BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
TRIM43Q96BQ3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 53.8 ms