Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 ELP6-209ENST00000446787 894 ntTSL 3 BASIC15.03■□□□□ -0
VPS33AQ96AX1 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
VPS33AQ96AX1 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.03■□□□□ -0
VPS33AQ96AX1 AL139010.1-201ENST00000454878 894 ntBASIC15.03■□□□□ -0
VPS33AQ96AX1 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC15.03■□□□□ -0
VPS33AQ96AX1 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC15.03■□□□□ -0
VPS33AQ96AX1 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC15.03■□□□□ -0
VPS33AQ96AX1 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC15.03■□□□□ -0
VPS33AQ96AX1 HNRNPUP1-201ENST00000554987 333 ntBASIC15.03■□□□□ -0
VPS33AQ96AX1 KLK3-204ENST00000593997 1035 ntTSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 AC097359.3-201ENST00000603982 1210 ntBASIC15.03■□□□□ -0
VPS33AQ96AX1 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 AC091812.2-201ENST00000619081 385 ntBASIC15.03■□□□□ -0
VPS33AQ96AX1 AC020934.3-201ENST00000639810 348 ntAPPRIS P1 TSL 3 BASIC15.03■□□□□ -0
VPS33AQ96AX1 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 SLC26A11-203ENST00000546047 2807 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 ZBED1P1-201ENST00000502364 1930 ntBASIC15.03■□□□□ -0
VPS33AQ96AX1 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
VPS33AQ96AX1 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC15.03■□□□□ -0
VPS33AQ96AX1 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC15.03■□□□□ -0
VPS33AQ96AX1 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 CYB5R1-201ENST00000367249 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
VPS33AQ96AX1 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC15.03■□□□□ -0
VPS33AQ96AX1 AL359258.3-201ENST00000622910 2331 ntBASIC15.03■□□□□ -0
VPS33AQ96AX1 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC15.02■□□□□ -0
VPS33AQ96AX1 SLC22A15-202ENST00000369503 4720 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS33AQ96AX1 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC15.02■□□□□ -0
VPS33AQ96AX1 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC15.02■□□□□ -0
VPS33AQ96AX1 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.02■□□□□ -0
VPS33AQ96AX1 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.02■□□□□ -0
VPS33AQ96AX1 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC15.02■□□□□ -0
VPS33AQ96AX1 WDR20-203ENST00000335263 2616 ntTSL 1 (best) BASIC15.02■□□□□ -0
VPS33AQ96AX1 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VPS33AQ96AX1 PNPLA5-201ENST00000216177 2539 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS33AQ96AX1 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.02■□□□□ -0
VPS33AQ96AX1 WDR74-206ENST00000529106 1366 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
VPS33AQ96AX1 RUNX1T1-251ENST00000615601 7372 ntAPPRIS ALT1 TSL 5 BASIC15.02■□□□□ -0
VPS33AQ96AX1 AC005912.2-201ENST00000619492 2400 ntBASIC15.02■□□□□ -0
VPS33AQ96AX1 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
VPS33AQ96AX1 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS33AQ96AX1 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS33AQ96AX1 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS33AQ96AX1 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
VPS33AQ96AX1 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
VPS33AQ96AX1 EEF1DP4-201ENST00000446006 880 ntBASIC15.02■□□□□ -0
VPS33AQ96AX1 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC15.02■□□□□ -0
VPS33AQ96AX1 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC15.02■□□□□ -0
VPS33AQ96AX1 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.02■□□□□ -0
VPS33AQ96AX1 IGHV3OR16-6-201ENST00000568775 360 ntBASIC15.02■□□□□ -0
VPS33AQ96AX1 PFN1-203ENST00000574872 1173 ntTSL 2 BASIC15.02■□□□□ -0
VPS33AQ96AX1 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC15.02■□□□□ -0
VPS33AQ96AX1 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC15.02■□□□□ -0
VPS33AQ96AX1 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC15.02■□□□□ -0
VPS33AQ96AX1 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.02□□□□□ -0.01
VPS33AQ96AX1 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VPS33AQ96AX1 KLHDC7A-201ENST00000400664 5145 ntAPPRIS P1 BASIC15.02□□□□□ -0.01
VPS33AQ96AX1 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VPS33AQ96AX1 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VPS33AQ96AX1 ANKRD20A5P-207ENST00000581935 2089 ntTSL 2 BASIC15.02□□□□□ -0.01
VPS33AQ96AX1 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
VPS33AQ96AX1 SLC40A1-201ENST00000261024 3442 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
VPS33AQ96AX1 SMARCA2-214ENST00000450198 5602 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
VPS33AQ96AX1 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
VPS33AQ96AX1 GALNTL6-205ENST00000511251 2905 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
VPS33AQ96AX1 ESRP2-202ENST00000473183 3793 ntAPPRIS P2 TSL 1 (best) BASIC15.02□□□□□ -0.01
VPS33AQ96AX1 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 CHID1-215ENST00000528581 1431 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 GPR17-201ENST00000272644 2062 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 CLTA-201ENST00000242285 1152 ntAPPRIS P4 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 SLC25A1P1-201ENST00000528351 927 ntBASIC15.01□□□□□ -0.01
VPS33AQ96AX1 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 AL133352.1-203ENST00000557395 1234 ntAPPRIS P5 TSL 2 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 AC243562.1-201ENST00000560672 389 ntBASIC15.01□□□□□ -0.01
VPS33AQ96AX1 AP000842.3-202ENST00000569238 1080 ntBASIC15.01□□□□□ -0.01
VPS33AQ96AX1 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC15.01□□□□□ -0.01
VPS33AQ96AX1 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 65.8 ms