Protein–RNA interactions for Protein: Q8TF72

SHROOM3, Protein Shroom3, humanhuman

Predictions only

Length 1,996 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3Q8TF72 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 CENPT-202ENST00000440851 2200 ntAPPRIS P2 TSL 5 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 RPS19-206ENST00000598742 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 TEX30-203ENST00000376022 828 ntTSL 2 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 GNAQP1-201ENST00000444815 1067 ntBASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 TRAPPC2L-206ENST00000564365 1060 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 OSBP2-209ENST00000438716 2747 ntAPPRIS ALT2 TSL 2 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 SHOX2-202ENST00000425436 1513 ntTSL 5 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 INTS4P2-202ENST00000614726 2019 ntBASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 TCAF2P1-201ENST00000291129 2421 ntBASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 MAP7-209ENST00000618822 4497 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
SHROOM3Q8TF72 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 LCN15-201ENST00000316144 762 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 NUTM2A-AS1-212ENST00000458739 733 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 AC093004.1-201ENST00000508850 424 ntBASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 SLC9A7P1-202ENST00000556476 2239 ntBASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 TBP-207ENST00000616883 1750 ntAPPRIS ALT2 TSL 5 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 LHCGR-202ENST00000401907 1477 ntTSL 5 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 POLL-217ENST00000628479 1953 ntTSL 5 BASIC15.8■□□□□ 0.12
SHROOM3Q8TF72 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 TPBG-202ENST00000535040 3392 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 DGAT2L6-201ENST00000333026 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 CIART-203ENST00000369095 1433 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
SHROOM3Q8TF72 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms