Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 AMBP-201ENST00000265132 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 TP73-209ENST00000603362 1668 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
CCDC148Q8NFR7 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
CCDC148Q8NFR7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 NBEA-201ENST00000310336 10794 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 NBEA-208ENST00000629018 10791 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 SLC7A15P-201ENST00000424028 1363 ntBASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 AL391825.1-201ENST00000457671 1364 ntBASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 TBC1D25-201ENST00000376771 4042 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 CALY-202ENST00000368555 783 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 TERF1P3-201ENST00000505638 1227 ntBASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 NEIL2-207ENST00000528323 998 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 AL132655.2-201ENST00000596276 594 ntBASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 AC092364.2-202ENST00000597012 1073 ntBASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 AC136621.1-201ENST00000624017 2304 ntBASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 PDGFA-201ENST00000354513 1308 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
CCDC148Q8NFR7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 ZSCAN2-203ENST00000334141 993 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 MAP9-202ENST00000379248 1165 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 MRPS6-201ENST00000399312 990 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 GREM1-201ENST00000560677 623 ntTSL 4 BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 ABLIM2-201ENST00000341937 2589 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 STK33-217ENST00000534493 1895 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC17.94■□□□□ 0.46
CCDC148Q8NFR7 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 SPATS1-201ENST00000288390 1354 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC17.93■□□□□ 0.46
CCDC148Q8NFR7 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms