Protein–RNA interactions for Protein: Q8IYR6

TMEFF1, Tomoregulin-1, humanhuman

Predictions only

Length 380 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEFF1Q8IYR6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 RN7SL190P-201ENST00000582519 257 ntBASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 CYGB-203ENST00000589145 788 ntTSL 3 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 AC020914.3-201ENST00000594712 304 ntBASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 HCG18-233ENST00000412685 2552 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 ZNF805-201ENST00000354309 2396 ntTSL 5 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 RUNX1-201ENST00000300305 6222 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC15.4■□□□□ 0.06
TMEFF1Q8IYR6 CTSB-201ENST00000345125 2028 ntAPPRIS P1 TSL 5 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 ADM-202ENST00000524948 584 ntTSL 2 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 ZFR2-208ENST00000592398 532 ntTSL 5 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 AC018695.7-201ENST00000624587 2492 ntBASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
TMEFF1Q8IYR6 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 RALYL-208ENST00000522455 2168 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 FRMD6-AS1-201ENST00000617151 2229 ntBASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 BOLA3-201ENST00000295326 444 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 TPM3P8-201ENST00000330554 643 ntBASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 RNU1-114P-201ENST00000365297 166 ntBASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 HNRNPA1P32-201ENST00000396326 963 ntBASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 KLF2P2-201ENST00000416807 1039 ntBASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 AC091804.1-201ENST00000486888 567 ntBASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 HIST2H2BC-201ENST00000498492 580 ntBASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 AC079328.1-201ENST00000560358 952 ntBASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 AP000439.4-201ENST00000567742 664 ntTSL 3 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 TBC1D16-203ENST00000570373 961 ntTSL 5 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 SLC44A1-203ENST00000374724 3088 ntAPPRIS ALT1 TSL 5 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC15.38■□□□□ 0.05
TMEFF1Q8IYR6 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC15.38■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms