Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC20.27■□□□□ 0.83
COL16A1Q07092 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC20.27■□□□□ 0.83
COL16A1Q07092 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC20.27■□□□□ 0.83
COL16A1Q07092 HDAC2-AS2-203ENST00000436876 591 ntTSL 5 BASIC20.27■□□□□ 0.83
COL16A1Q07092 GLIS3-AS1-201ENST00000451340 734 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL16A1Q07092 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC20.27■□□□□ 0.83
COL16A1Q07092 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC20.27■□□□□ 0.83
COL16A1Q07092 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
COL16A1Q07092 AL132709.1-203ENST00000555103 569 ntTSL 4 BASIC20.27■□□□□ 0.83
COL16A1Q07092 MIR5001-201ENST00000580185 100 ntBASIC20.27■□□□□ 0.83
COL16A1Q07092 ALKBH7-202ENST00000596657 603 ntTSL 2 BASIC20.27■□□□□ 0.83
COL16A1Q07092 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC20.27■□□□□ 0.83
COL16A1Q07092 IQSEC2-207ENST00000638583 722 ntTSL 5 BASIC20.27■□□□□ 0.83
COL16A1Q07092 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL16A1Q07092 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC20.27■□□□□ 0.83
COL16A1Q07092 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL16A1Q07092 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
COL16A1Q07092 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC20.26■□□□□ 0.83
COL16A1Q07092 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC20.26■□□□□ 0.83
COL16A1Q07092 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL16A1Q07092 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL16A1Q07092 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
COL16A1Q07092 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL16A1Q07092 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC20.26■□□□□ 0.83
COL16A1Q07092 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL16A1Q07092 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC20.26■□□□□ 0.83
COL16A1Q07092 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL16A1Q07092 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL16A1Q07092 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
COL16A1Q07092 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL16A1Q07092 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC20.26■□□□□ 0.83
COL16A1Q07092 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC20.26■□□□□ 0.83
COL16A1Q07092 ZSCAN2-208ENST00000485222 910 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL16A1Q07092 RNA5SP417-201ENST00000516459 108 ntBASIC20.26■□□□□ 0.83
COL16A1Q07092 ZSCAN2-210ENST00000538076 1109 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL16A1Q07092 SNHG15-205ENST00000580458 710 ntTSL 2 BASIC20.26■□□□□ 0.83
COL16A1Q07092 AC106774.7-201ENST00000638408 597 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COL16A1Q07092 AC106774.6-201ENST00000638483 597 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COL16A1Q07092 AC233724.20-201ENST00000638842 597 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COL16A1Q07092 AC233724.19-201ENST00000639969 597 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COL16A1Q07092 AC106774.5-201ENST00000640558 597 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COL16A1Q07092 AC233724.18-201ENST00000640803 597 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COL16A1Q07092 AC233724.21-201ENST00000640846 597 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
COL16A1Q07092 SLC35F3-202ENST00000366618 2891 ntAPPRIS P3 TSL 2 BASIC20.26■□□□□ 0.83
COL16A1Q07092 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC20.26■□□□□ 0.83
COL16A1Q07092 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
COL16A1Q07092 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
COL16A1Q07092 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
COL16A1Q07092 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC20.25■□□□□ 0.83
COL16A1Q07092 ZNF598-204ENST00000563630 3371 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL16A1Q07092 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL16A1Q07092 SURF4-203ENST00000371991 715 ntTSL 3 BASIC20.25■□□□□ 0.83
COL16A1Q07092 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL16A1Q07092 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL16A1Q07092 XG-202ENST00000419513 979 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL16A1Q07092 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL16A1Q07092 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC20.25■□□□□ 0.83
COL16A1Q07092 RBM4-207ENST00000506523 654 ntTSL 3 BASIC20.25■□□□□ 0.83
COL16A1Q07092 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC20.25■□□□□ 0.83
COL16A1Q07092 SRP14-204ENST00000558720 780 ntTSL 2 BASIC20.25■□□□□ 0.83
COL16A1Q07092 AL022334.2-201ENST00000610000 484 ntBASIC20.25■□□□□ 0.83
COL16A1Q07092 AC024941.2-201ENST00000625763 493 ntTSL 2 BASIC20.25■□□□□ 0.83
COL16A1Q07092 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL16A1Q07092 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
COL16A1Q07092 BX005266.2-201ENST00000450704 1549 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL16A1Q07092 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL16A1Q07092 KCNT1-201ENST00000263604 5245 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
COL16A1Q07092 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL16A1Q07092 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL16A1Q07092 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL16A1Q07092 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL16A1Q07092 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
COL16A1Q07092 MARK2P16-201ENST00000605714 1723 ntBASIC20.25■□□□□ 0.83
COL16A1Q07092 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
COL16A1Q07092 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL16A1Q07092 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC20.24■□□□□ 0.83
COL16A1Q07092 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COL16A1Q07092 NME4-203ENST00000397722 1232 ntTSL 2 BASIC20.24■□□□□ 0.83
COL16A1Q07092 PPM1N-205ENST00000401705 771 ntTSL 3 BASIC20.24■□□□□ 0.83
COL16A1Q07092 RN7SKP109-201ENST00000410592 316 ntBASIC20.24■□□□□ 0.83
COL16A1Q07092 AC026470.1-201ENST00000478038 846 ntBASIC20.24■□□□□ 0.83
COL16A1Q07092 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC20.24■□□□□ 0.83
COL16A1Q07092 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC20.24■□□□□ 0.83
COL16A1Q07092 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
COL16A1Q07092 AC004686.1-201ENST00000605113 538 ntBASIC20.24■□□□□ 0.83
COL16A1Q07092 AC006548.2-201ENST00000605217 529 ntBASIC20.24■□□□□ 0.83
COL16A1Q07092 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC20.24■□□□□ 0.83
COL16A1Q07092 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL16A1Q07092 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL16A1Q07092 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL16A1Q07092 MST1L-201ENST00000442552 2185 ntBASIC20.24■□□□□ 0.83
COL16A1Q07092 STAG1-206ENST00000480733 1304 ntTSL 2 BASIC20.24■□□□□ 0.83
COL16A1Q07092 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL16A1Q07092 AL157414.3-201ENST00000624276 1954 ntBASIC20.24■□□□□ 0.83
COL16A1Q07092 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
COL16A1Q07092 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL16A1Q07092 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
COL16A1Q07092 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
COL16A1Q07092 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
COL16A1Q07092 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 132.3 ms