Protein–RNA interactions for Protein: P61009

SPCS3, Signal peptidase complex subunit 3, humanhuman

Predictions only

Length 180 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3P61009 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SPCS3P61009 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC12.77□□□□□ -0.36
SPCS3P61009 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
SPCS3P61009 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SPCS3P61009 RNH1-224ENST00000534797 2973 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
SPCS3P61009 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC12.77□□□□□ -0.37
SPCS3P61009 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SPCS3P61009 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SPCS3P61009 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC12.77□□□□□ -0.37
SPCS3P61009 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC12.77□□□□□ -0.37
SPCS3P61009 IPPK-202ENST00000375522 882 ntTSL 3 BASIC12.77□□□□□ -0.37
SPCS3P61009 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
SPCS3P61009 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC12.77□□□□□ -0.37
SPCS3P61009 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC12.77□□□□□ -0.37
SPCS3P61009 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC12.77□□□□□ -0.37
SPCS3P61009 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
SPCS3P61009 MLF1-206ENST00000471745 1266 ntTSL 2 BASIC12.77□□□□□ -0.37
SPCS3P61009 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC12.77□□□□□ -0.37
SPCS3P61009 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SPCS3P61009 KRT18P56-201ENST00000507275 550 ntBASIC12.77□□□□□ -0.37
SPCS3P61009 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC12.77□□□□□ -0.37
SPCS3P61009 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC12.77□□□□□ -0.37
SPCS3P61009 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SPCS3P61009 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC12.77□□□□□ -0.37
SPCS3P61009 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC12.77□□□□□ -0.37
SPCS3P61009 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC12.77□□□□□ -0.37
SPCS3P61009 AC061975.2-201ENST00000581722 295 ntBASIC12.77□□□□□ -0.37
SPCS3P61009 AL049840.3-201ENST00000602669 611 ntBASIC12.77□□□□□ -0.37
SPCS3P61009 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC12.77□□□□□ -0.37
SPCS3P61009 AC004877.2-201ENST00000623941 599 ntBASIC12.77□□□□□ -0.37
SPCS3P61009 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC12.77□□□□□ -0.37
SPCS3P61009 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 TAF15-205ENST00000603777 2011 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
SPCS3P61009 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.77□□□□□ -0.37
SPCS3P61009 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SPCS3P61009 SIRT6-214ENST00000601488 1361 ntTSL 3 BASIC12.77□□□□□ -0.37
SPCS3P61009 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.77□□□□□ -0.37
SPCS3P61009 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 ZNF519-206ENST00000589498 2117 ntTSL 2 BASIC12.77□□□□□ -0.37
SPCS3P61009 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC12.77□□□□□ -0.37
SPCS3P61009 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 PIK3CG-201ENST00000359195 5377 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
SPCS3P61009 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
SPCS3P61009 AC018892.3-201ENST00000623986 2499 ntBASIC12.77□□□□□ -0.37
SPCS3P61009 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC12.77□□□□□ -0.37
SPCS3P61009 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.76□□□□□ -0.37
SPCS3P61009 SERPINA3-203ENST00000467132 2660 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SPCS3P61009 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC12.76□□□□□ -0.37
SPCS3P61009 HERPUD1-201ENST00000300302 1862 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
SPCS3P61009 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.76□□□□□ -0.37
SPCS3P61009 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 GPS1-227ENST00000623761 1943 ntTSL 2 BASIC12.76□□□□□ -0.37
SPCS3P61009 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 AGAP7P-201ENST00000582299 2062 ntBASIC12.76□□□□□ -0.37
SPCS3P61009 AGAP14-201ENST00000624701 2060 ntBASIC12.76□□□□□ -0.37
SPCS3P61009 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC12.76□□□□□ -0.37
SPCS3P61009 RAF1-201ENST00000251849 3300 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SPCS3P61009 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC12.76□□□□□ -0.37
SPCS3P61009 AC004870.1-201ENST00000315132 882 ntBASIC12.76□□□□□ -0.37
SPCS3P61009 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 AC002056.1-201ENST00000395613 760 ntBASIC12.76□□□□□ -0.37
SPCS3P61009 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC12.76□□□□□ -0.37
SPCS3P61009 FAAHP1-202ENST00000446499 1238 ntBASIC12.76□□□□□ -0.37
SPCS3P61009 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC12.76□□□□□ -0.37
SPCS3P61009 AC105233.2-201ENST00000523697 349 ntBASIC12.76□□□□□ -0.37
SPCS3P61009 AF228730.5-201ENST00000530288 346 ntBASIC12.76□□□□□ -0.37
SPCS3P61009 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC12.76□□□□□ -0.37
SPCS3P61009 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
SPCS3P61009 LITAF-211ENST00000572255 516 ntTSL 4 BASIC12.76□□□□□ -0.37
SPCS3P61009 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
SPCS3P61009 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC12.76□□□□□ -0.37
SPCS3P61009 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC12.76□□□□□ -0.37
SPCS3P61009 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 REM2-202ENST00000536884 1331 ntTSL 2 BASIC12.76□□□□□ -0.37
SPCS3P61009 NRP2-205ENST00000412873 2730 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
SPCS3P61009 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC12.76□□□□□ -0.37
SPCS3P61009 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.7 ms