Protein–RNA interactions for Protein: P50613

CDK7, Cyclin-dependent kinase 7, humanhuman

Predictions only

Length 346 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK7P50613 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
CDK7P50613 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK7P50613 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDK7P50613 KLHDC8A-205ENST00000539253 2931 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
CDK7P50613 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
CDK7P50613 RPL3L-201ENST00000268661 2182 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK7P50613 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK7P50613 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
CDK7P50613 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
CDK7P50613 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
CDK7P50613 KCNQ2-202ENST00000344462 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC17.11■□□□□ 0.33
CDK7P50613 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC17.11■□□□□ 0.33
CDK7P50613 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
CDK7P50613 PAX6-276ENST00000640684 1557 ntTSL 5 BASIC17.11■□□□□ 0.33
CDK7P50613 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 TAF1D-203ENST00000448108 2082 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
CDK7P50613 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 AC092850.2-201ENST00000623821 2697 ntBASIC17.11■□□□□ 0.33
CDK7P50613 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 AL023775.1-201ENST00000454907 1746 ntBASIC17.11■□□□□ 0.33
CDK7P50613 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC17.11■□□□□ 0.33
CDK7P50613 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 TPM3P8-201ENST00000330554 643 ntBASIC17.11■□□□□ 0.33
CDK7P50613 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
CDK7P50613 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 BMS1P17-203ENST00000444357 552 ntTSL 4 BASIC17.11■□□□□ 0.33
CDK7P50613 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.11■□□□□ 0.33
CDK7P50613 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 MIR4722-201ENST00000578292 60 ntBASIC17.11■□□□□ 0.33
CDK7P50613 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC17.11■□□□□ 0.33
CDK7P50613 NAT9-224ENST00000583757 583 ntTSL 3 BASIC17.11■□□□□ 0.33
CDK7P50613 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 NDUFV2P1-201ENST00000596415 907 ntBASIC17.11■□□□□ 0.33
CDK7P50613 BMS1P22-203ENST00000609679 552 ntTSL 4 BASIC17.11■□□□□ 0.33
CDK7P50613 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC17.11■□□□□ 0.33
CDK7P50613 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC17.11■□□□□ 0.33
CDK7P50613 NRP1-203ENST00000374821 1988 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.11■□□□□ 0.33
CDK7P50613 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.11■□□□□ 0.33
CDK7P50613 C5orf24-202ENST00000394976 5065 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
CDK7P50613 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC17.1■□□□□ 0.33
CDK7P50613 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK7P50613 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC17.1■□□□□ 0.33
CDK7P50613 FUK-207ENST00000571514 3054 ntTSL 2 BASIC17.1■□□□□ 0.33
CDK7P50613 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK7P50613 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
CDK7P50613 ZNF628-201ENST00000391718 3177 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
CDK7P50613 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK7P50613 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
CDK7P50613 AC011477.6-201ENST00000604980 1927 ntBASIC17.1■□□□□ 0.33
CDK7P50613 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
CDK7P50613 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC17.1■□□□□ 0.33
CDK7P50613 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK7P50613 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
CDK7P50613 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC17.1■□□□□ 0.33
CDK7P50613 AL161719.1-201ENST00000442716 385 ntTSL 5 BASIC17.1■□□□□ 0.33
CDK7P50613 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC17.1■□□□□ 0.33
CDK7P50613 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC17.1■□□□□ 0.33
CDK7P50613 NAALADL1-207ENST00000526799 959 ntTSL 5 BASIC17.1■□□□□ 0.33
CDK7P50613 MIR4313-201ENST00000580760 101 ntBASIC17.1■□□□□ 0.33
CDK7P50613 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC17.1■□□□□ 0.33
CDK7P50613 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.1■□□□□ 0.33
CDK7P50613 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.1■□□□□ 0.33
CDK7P50613 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC17.1■□□□□ 0.33
CDK7P50613 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC17.1■□□□□ 0.33
CDK7P50613 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
CDK7P50613 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK7P50613 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC17.1■□□□□ 0.33
CDK7P50613 PBX1-219ENST00000560641 3225 ntTSL 5 BASIC17.1■□□□□ 0.33
CDK7P50613 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.1■□□□□ 0.33
CDK7P50613 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK7P50613 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK7P50613 AL354989.2-201ENST00000435838 1540 ntBASIC17.1■□□□□ 0.33
CDK7P50613 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK7P50613 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC17.1■□□□□ 0.33
CDK7P50613 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
CDK7P50613 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK7P50613 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
CDK7P50613 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK7P50613 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
CDK7P50613 AC148477.4-201ENST00000613430 1793 ntBASIC17.1■□□□□ 0.33
CDK7P50613 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC17.1■□□□□ 0.33
CDK7P50613 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
CDK7P50613 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK7P50613 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CDK7P50613 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.09■□□□□ 0.33
CDK7P50613 UPK3B-202ENST00000334348 2373 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
CDK7P50613 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
CDK7P50613 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CDK7P50613 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 31.9 ms