Protein–RNA interactions for Protein: P19397

CD53, Leukocyte surface antigen CD53, humanhuman

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD53P19397 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
CD53P19397 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.23□□□□□ -0.13
CD53P19397 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
CD53P19397 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
CD53P19397 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC14.22□□□□□ -0.13
CD53P19397 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 AC112484.1-201ENST00000508239 2291 ntAPPRIS P5 TSL 2 BASIC14.22□□□□□ -0.13
CD53P19397 AL390755.1-201ENST00000623716 2027 ntBASIC14.22□□□□□ -0.13
CD53P19397 CD93-201ENST00000246006 6708 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CD53P19397 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.22□□□□□ -0.13
CD53P19397 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC14.22□□□□□ -0.13
CD53P19397 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CD53P19397 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 TM4SF4-201ENST00000305354 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC14.22□□□□□ -0.13
CD53P19397 NME2-201ENST00000393183 568 ntTSL 2 BASIC14.22□□□□□ -0.13
CD53P19397 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC14.22□□□□□ -0.13
CD53P19397 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC14.22□□□□□ -0.13
CD53P19397 AP001471.1-201ENST00000454245 672 ntTSL 3 BASIC14.22□□□□□ -0.13
CD53P19397 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.22□□□□□ -0.13
CD53P19397 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC14.22□□□□□ -0.13
CD53P19397 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 LY6E-204ENST00000519546 971 ntTSL 2 BASIC14.22□□□□□ -0.13
CD53P19397 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
CD53P19397 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC14.22□□□□□ -0.13
CD53P19397 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC14.22□□□□□ -0.13
CD53P19397 SPDYE12P-201ENST00000618416 771 ntBASIC14.22□□□□□ -0.13
CD53P19397 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CD53P19397 C18orf15-201ENST00000623680 2534 ntBASIC14.22□□□□□ -0.13
CD53P19397 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC14.22□□□□□ -0.13
CD53P19397 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
CD53P19397 SIRT6-202ENST00000337491 1641 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 ACSM2A-203ENST00000417235 1835 ntTSL 2 BASIC14.22□□□□□ -0.13
CD53P19397 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC14.22□□□□□ -0.13
CD53P19397 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
CD53P19397 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 ACOXL-201ENST00000340561 2188 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
CD53P19397 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
CD53P19397 KRT8P44-201ENST00000441609 1350 ntBASIC14.22□□□□□ -0.13
CD53P19397 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 PCK2-203ENST00000545054 2505 ntTSL 2 BASIC14.21□□□□□ -0.13
CD53P19397 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.21□□□□□ -0.13
CD53P19397 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC14.21□□□□□ -0.13
CD53P19397 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 CFLAR-214ENST00000443227 1679 ntTSL 2 BASIC14.21□□□□□ -0.13
CD53P19397 NARF-206ENST00000457415 1668 ntTSL 5 BASIC14.21□□□□□ -0.13
CD53P19397 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC14.21□□□□□ -0.13
CD53P19397 MAP3K4-202ENST00000366919 5397 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 DGKI-201ENST00000288490 3895 ntAPPRIS P3 TSL 5 BASIC14.21□□□□□ -0.13
CD53P19397 FHL2-201ENST00000322142 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC14.21□□□□□ -0.13
CD53P19397 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC14.21□□□□□ -0.13
CD53P19397 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC14.21□□□□□ -0.13
CD53P19397 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC14.21□□□□□ -0.13
CD53P19397 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.21□□□□□ -0.13
CD53P19397 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.21□□□□□ -0.13
CD53P19397 AL136311.1-206ENST00000416069 899 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 RPSAP31-202ENST00000445165 716 ntTSL 2 BASIC14.21□□□□□ -0.13
CD53P19397 MUSTN1-201ENST00000446157 721 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 SPTLC1P1-201ENST00000447199 261 ntBASIC14.21□□□□□ -0.13
CD53P19397 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.21□□□□□ -0.13
CD53P19397 NAA50-208ENST00000497255 789 ntTSL 5 BASIC14.21□□□□□ -0.13
CD53P19397 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC14.21□□□□□ -0.13
CD53P19397 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.21□□□□□ -0.13
CD53P19397 TATDN3-212ENST00000530441 492 ntTSL 3 BASIC14.21□□□□□ -0.13
CD53P19397 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.21□□□□□ -0.13
CD53P19397 RARRES2P9-201ENST00000565168 469 ntBASIC14.21□□□□□ -0.13
CD53P19397 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC14.21□□□□□ -0.13
CD53P19397 AC003101.2-201ENST00000612557 442 ntBASIC14.21□□□□□ -0.13
CD53P19397 MIR6752-201ENST00000618442 71 ntBASIC14.21□□□□□ -0.13
CD53P19397 CLCN2-201ENST00000265593 3290 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
CD53P19397 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
CD53P19397 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC14.21□□□□□ -0.13
CD53P19397 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 59.3 ms