Protein–RNA interactions for Protein: P08908

HTR1A, 5-hydroxytryptamine receptor 1A, humanhuman

Predictions only

Length 422 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR1AP08908 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC14.26□□□□□ -0.13
HTR1AP08908 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.26□□□□□ -0.13
HTR1AP08908 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HTR1AP08908 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC14.26□□□□□ -0.13
HTR1AP08908 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
HTR1AP08908 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
HTR1AP08908 SEMA4F-210ENST00000611975 6007 ntTSL 5 BASIC14.26□□□□□ -0.13
HTR1AP08908 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HTR1AP08908 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HTR1AP08908 AC090099.1-203ENST00000527059 2945 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HTR1AP08908 CICP8-201ENST00000455800 2813 ntBASIC14.26□□□□□ -0.13
HTR1AP08908 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HTR1AP08908 FGFR2-207ENST00000359354 1680 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HTR1AP08908 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
HTR1AP08908 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC14.26□□□□□ -0.13
HTR1AP08908 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HTR1AP08908 MYH6-202ENST00000405093 5941 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
HTR1AP08908 AC004943.2-201ENST00000563328 4842 ntTSL 3 BASIC14.26□□□□□ -0.13
HTR1AP08908 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC14.26□□□□□ -0.13
HTR1AP08908 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC14.26□□□□□ -0.13
HTR1AP08908 GABRA1-201ENST00000023897 2083 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
HTR1AP08908 CEP135-202ENST00000422247 2092 ntTSL 2 BASIC14.26□□□□□ -0.13
HTR1AP08908 AC018529.2-202ENST00000611482 3087 ntBASIC14.26□□□□□ -0.13
HTR1AP08908 ZBTB45P2-201ENST00000452245 1531 ntBASIC14.25□□□□□ -0.13
HTR1AP08908 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 KIAA1257-204ENST00000511438 2408 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
HTR1AP08908 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC14.25□□□□□ -0.13
HTR1AP08908 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 PSMD9-207ENST00000541212 2784 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 MAEL-201ENST00000367870 1831 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC14.25□□□□□ -0.13
HTR1AP08908 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
HTR1AP08908 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC14.25□□□□□ -0.13
HTR1AP08908 KRT18P34-201ENST00000488218 1270 ntBASIC14.25□□□□□ -0.13
HTR1AP08908 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC14.25□□□□□ -0.13
HTR1AP08908 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC14.25□□□□□ -0.13
HTR1AP08908 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC14.25□□□□□ -0.13
HTR1AP08908 AC002347.1-201ENST00000569543 541 ntBASIC14.25□□□□□ -0.13
HTR1AP08908 NT5C-211ENST00000582170 653 ntTSL 3 BASIC14.25□□□□□ -0.13
HTR1AP08908 OAZ1-202ENST00000582888 969 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
HTR1AP08908 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC14.25□□□□□ -0.13
HTR1AP08908 NOL12-207ENST00000611699 903 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC14.25□□□□□ -0.13
HTR1AP08908 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC14.25□□□□□ -0.13
HTR1AP08908 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC14.25□□□□□ -0.13
HTR1AP08908 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC14.25□□□□□ -0.13
HTR1AP08908 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 NXPH1-201ENST00000405863 2921 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 RLF-201ENST00000372771 6246 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 RAP1GAP-211ENST00000495204 2489 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 UBTF-205ENST00000526094 2459 ntTSL 5 BASIC14.25□□□□□ -0.13
HTR1AP08908 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 TBCE-201ENST00000366601 1966 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC14.25□□□□□ -0.13
HTR1AP08908 SLC2A13-201ENST00000280871 7003 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HTR1AP08908 MRVI1-204ENST00000527509 2686 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 FAM107A-206ENST00000474531 2271 ntTSL 2 BASIC14.25□□□□□ -0.13
HTR1AP08908 NPM2-209ENST00000521157 1484 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
HTR1AP08908 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
HTR1AP08908 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
HTR1AP08908 AC099521.3-201ENST00000624251 2938 ntBASIC14.25□□□□□ -0.13
HTR1AP08908 DDR1-271ENST00000513240 2882 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
HTR1AP08908 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
HTR1AP08908 FXYD6-207ENST00000527717 1799 ntAPPRIS P2 TSL 2 BASIC14.24□□□□□ -0.13
HTR1AP08908 COL6A4P2-202ENST00000504443 2753 ntBASIC14.24□□□□□ -0.13
HTR1AP08908 AC011474.4-201ENST00000623523 2076 ntBASIC14.24□□□□□ -0.13
HTR1AP08908 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HTR1AP08908 NFIC-203ENST00000443272 1716 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
HTR1AP08908 ARHGEF1-202ENST00000347545 3091 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HTR1AP08908 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HTR1AP08908 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HTR1AP08908 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
HTR1AP08908 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
HTR1AP08908 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HTR1AP08908 WNT3A-201ENST00000284523 2932 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HTR1AP08908 AC098591.1-201ENST00000381811 1613 ntTSL 2 BASIC14.24□□□□□ -0.13
HTR1AP08908 HNRNPH1-203ENST00000393432 2279 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HTR1AP08908 PLA2G16-201ENST00000323646 2594 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HTR1AP08908 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HTR1AP08908 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
HTR1AP08908 RPS2P28-201ENST00000314255 741 ntBASIC14.24□□□□□ -0.13
HTR1AP08908 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms