Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 ELOA-204ENST00000613537 4924 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CAPN1P07384 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 KRT8P37-201ENST00000451609 1420 ntBASIC15.41■□□□□ 0.06
CAPN1P07384 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN1P07384 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 GOLGA2P7-202ENST00000400817 2850 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 MYLK2-201ENST00000375985 2787 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 AC022144.1-201ENST00000602255 1580 ntBASIC15.41■□□□□ 0.06
CAPN1P07384 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 PDE8B-204ENST00000342343 2677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 CD1E-212ENST00000368167 1458 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPN1P07384 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.4■□□□□ 0.06
CAPN1P07384 DIP2A-201ENST00000400274 7023 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CAPN1P07384 XRCC1-202ENST00000543982 1994 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPN1P07384 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 PTPRO-201ENST00000281171 5301 ntAPPRIS P3 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.4■□□□□ 0.06
CAPN1P07384 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.4■□□□□ 0.06
CAPN1P07384 RPL37AP1-201ENST00000412502 279 ntBASIC15.4■□□□□ 0.06
CAPN1P07384 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC15.4■□□□□ 0.06
CAPN1P07384 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPN1P07384 AC009477.1-201ENST00000452936 217 ntBASIC15.4■□□□□ 0.06
CAPN1P07384 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 AC025183.2-201ENST00000503386 428 ntTSL 3 BASIC15.4■□□□□ 0.06
CAPN1P07384 CCDC74BP1-201ENST00000508880 1123 ntBASIC15.4■□□□□ 0.06
CAPN1P07384 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPN1P07384 AC123777.1-201ENST00000534827 1247 ntTSL 3 BASIC15.4■□□□□ 0.06
CAPN1P07384 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC15.4■□□□□ 0.06
CAPN1P07384 AC026803.2-201ENST00000599784 819 ntTSL 3 BASIC15.4■□□□□ 0.06
CAPN1P07384 AL450472.2-201ENST00000603663 1156 ntBASIC15.4■□□□□ 0.06
CAPN1P07384 TEX28P1-201ENST00000613479 1221 ntBASIC15.4■□□□□ 0.06
CAPN1P07384 TEX28P2-201ENST00000617764 1221 ntBASIC15.4■□□□□ 0.06
CAPN1P07384 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC15.4■□□□□ 0.06
CAPN1P07384 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 PRRG2-201ENST00000246794 1404 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CAPN1P07384 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.4■□□□□ 0.06
CAPN1P07384 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CAPN1P07384 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 CERNA1-202ENST00000560518 1972 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPN1P07384 AC112693.3-201ENST00000624819 1983 ntBASIC15.4■□□□□ 0.06
CAPN1P07384 CLCN2-202ENST00000344937 3187 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 BEND5-201ENST00000371833 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC15.4■□□□□ 0.06
CAPN1P07384 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC15.4■□□□□ 0.06
CAPN1P07384 C18orf15-201ENST00000623680 2534 ntBASIC15.4■□□□□ 0.06
CAPN1P07384 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.4■□□□□ 0.06
CAPN1P07384 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC15.4■□□□□ 0.06
CAPN1P07384 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC15.39■□□□□ 0.05
CAPN1P07384 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 IL18BP-204ENST00000393703 1788 ntAPPRIS P2 TSL 3 BASIC15.39■□□□□ 0.05
CAPN1P07384 TOM1-209ENST00000447733 2317 ntTSL 2 BASIC15.39■□□□□ 0.05
CAPN1P07384 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC15.39■□□□□ 0.05
CAPN1P07384 USP36-201ENST00000312010 5234 ntAPPRIS P2 TSL 5 BASIC15.39■□□□□ 0.05
CAPN1P07384 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 TDG-209ENST00000544861 1387 ntTSL 2 BASIC15.39■□□□□ 0.05
CAPN1P07384 NRCAM-217ENST00000613830 3025 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC15.39■□□□□ 0.05
CAPN1P07384 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 AC127383.1-201ENST00000444697 1800 ntBASIC15.39■□□□□ 0.05
CAPN1P07384 LFNG-202ENST00000338732 1968 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 COPE-202ENST00000349893 948 ntTSL 2 BASIC15.39■□□□□ 0.05
CAPN1P07384 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 HNRNPA3P1-201ENST00000401429 1139 ntBASIC15.39■□□□□ 0.05
CAPN1P07384 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.39■□□□□ 0.05
CAPN1P07384 HNRNPA3P5-201ENST00000455201 833 ntBASIC15.39■□□□□ 0.05
CAPN1P07384 UBE2H-204ENST00000473814 535 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 CFL1-212ENST00000531413 636 ntTSL 3 BASIC15.39■□□□□ 0.05
CAPN1P07384 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC15.39■□□□□ 0.05
CAPN1P07384 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 DM1-AS-201ENST00000586251 483 ntTSL 2 BASIC15.39■□□□□ 0.05
CAPN1P07384 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC15.39■□□□□ 0.05
CAPN1P07384 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
CAPN1P07384 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC15.39■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms