Protein–RNA interactions for Protein: O76090

BEST1, Bestrophin-1, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1O76090 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST1O76090 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST1O76090 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.25■□□□□ 0.19
BEST1O76090 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
BEST1O76090 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC16.25■□□□□ 0.19
BEST1O76090 INPP5K-204ENST00000421807 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 AC013268.4-201ENST00000637413 2228 ntBASIC16.25■□□□□ 0.19
BEST1O76090 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
BEST1O76090 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
BEST1O76090 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC16.25■□□□□ 0.19
BEST1O76090 PPHLN1-201ENST00000256678 1820 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST1O76090 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 CACNG5-201ENST00000307139 926 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
BEST1O76090 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 AC112492.5-201ENST00000421897 457 ntBASIC16.25■□□□□ 0.19
BEST1O76090 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.25■□□□□ 0.19
BEST1O76090 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST1O76090 AP001063.1-201ENST00000568332 529 ntBASIC16.25■□□□□ 0.19
BEST1O76090 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC16.25■□□□□ 0.19
BEST1O76090 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 ARHGAP45-212ENST00000590577 3218 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST1O76090 PGPEP1-201ENST00000252813 1409 ntTSL 2 BASIC16.25■□□□□ 0.19
BEST1O76090 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC16.25■□□□□ 0.19
BEST1O76090 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 AC007787.1-201ENST00000588095 1583 ntBASIC16.25■□□□□ 0.19
BEST1O76090 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC16.25■□□□□ 0.19
BEST1O76090 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
BEST1O76090 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.24■□□□□ 0.19
BEST1O76090 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 SKOR1-201ENST00000341418 3332 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC16.24■□□□□ 0.19
BEST1O76090 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 AC093525.8-201ENST00000624099 1342 ntBASIC16.24■□□□□ 0.19
BEST1O76090 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST1O76090 STRN-202ENST00000379213 2254 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST1O76090 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC16.24■□□□□ 0.19
BEST1O76090 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC16.24■□□□□ 0.19
BEST1O76090 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST1O76090 CELP-203ENST00000624767 2414 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST1O76090 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 NCK1-201ENST00000288986 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.24■□□□□ 0.19
BEST1O76090 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC16.24■□□□□ 0.19
BEST1O76090 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 CROCCP4-201ENST00000457096 498 ntBASIC16.24■□□□□ 0.19
BEST1O76090 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
BEST1O76090 AP001889.1-201ENST00000525414 633 ntBASIC16.24■□□□□ 0.19
BEST1O76090 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC16.24■□□□□ 0.19
BEST1O76090 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
BEST1O76090 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST1O76090 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC16.24■□□□□ 0.19
BEST1O76090 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST1O76090 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
BEST1O76090 APOC4-201ENST00000591600 348 ntTSL 3 BASIC16.24■□□□□ 0.19
BEST1O76090 AC015936.2-201ENST00000593177 259 ntBASIC16.24■□□□□ 0.19
BEST1O76090 BTNL10-201ENST00000595971 695 ntBASIC16.24■□□□□ 0.19
BEST1O76090 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST1O76090 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC16.24■□□□□ 0.19
BEST1O76090 AL645728.2-202ENST00000641679 227 ntBASIC16.24■□□□□ 0.19
BEST1O76090 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
BEST1O76090 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
BEST1O76090 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST1O76090 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
BEST1O76090 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC16.24■□□□□ 0.19
BEST1O76090 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC16.24■□□□□ 0.19
BEST1O76090 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.24■□□□□ 0.19
BEST1O76090 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
BEST1O76090 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
BEST1O76090 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
BEST1O76090 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms