Protein–RNA interactions for Protein: O75346

ZNF253, Zinc finger protein 253, humanhuman

Predictions only

Length 499 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF253O75346 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
ZNF253O75346 RER1-202ENST00000378512 1404 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC12.22□□□□□ -0.45
ZNF253O75346 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 GRIK5-201ENST00000262895 3493 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ZNF253O75346 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 DPY19L2P2-201ENST00000312132 4078 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 TUBB3-206ENST00000554444 1978 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF253O75346 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF253O75346 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 PRYP6-201ENST00000514804 343 ntBASIC12.22□□□□□ -0.45
ZNF253O75346 AC091182.1-202ENST00000518765 713 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC12.22□□□□□ -0.45
ZNF253O75346 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF253O75346 AC020978.5-201ENST00000564147 533 ntTSL 4 BASIC12.22□□□□□ -0.45
ZNF253O75346 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC12.22□□□□□ -0.45
ZNF253O75346 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF253O75346 AC010507.1-201ENST00000633895 436 ntBASIC12.22□□□□□ -0.45
ZNF253O75346 ABR-228ENST00000574437 3196 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF253O75346 ATCAY-201ENST00000450849 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 TNN-203ENST00000622870 3719 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF253O75346 SMC5-201ENST00000361138 5980 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 TATDN3-202ENST00000366974 2389 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 DISP3-201ENST00000294484 5215 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 GRSF1-201ENST00000254799 6666 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ZNF253O75346 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
ZNF253O75346 PDPR-202ENST00000398122 2734 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 AC112229.3-201ENST00000603767 3202 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 AC013271.1-201ENST00000640669 3202 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 RAB7A-203ENST00000482525 1589 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
ZNF253O75346 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.22□□□□□ -0.45
ZNF253O75346 MARS-233ENST00000628866 2583 ntTSL 5 BASIC12.22□□□□□ -0.45
ZNF253O75346 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
ZNF253O75346 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.21□□□□□ -0.45
ZNF253O75346 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 OS9-207ENST00000439210 1946 ntTSL 2 BASIC12.21□□□□□ -0.45
ZNF253O75346 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 AC009090.5-201ENST00000624886 2285 ntBASIC12.21□□□□□ -0.45
ZNF253O75346 PLA2G4B-202ENST00000458483 2734 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
ZNF253O75346 KLHDC8A-202ENST00000367156 3177 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
ZNF253O75346 C17orf107-201ENST00000381365 3199 ntAPPRIS P2 TSL 2 BASIC12.21□□□□□ -0.45
ZNF253O75346 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.21□□□□□ -0.45
ZNF253O75346 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 PEG13-201ENST00000631594 5667 ntBASIC12.21□□□□□ -0.45
ZNF253O75346 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 CRACR2A-201ENST00000252322 2186 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC12.21□□□□□ -0.45
ZNF253O75346 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
ZNF253O75346 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC12.21□□□□□ -0.45
ZNF253O75346 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
ZNF253O75346 GPX1P2-201ENST00000429271 606 ntBASIC12.21□□□□□ -0.45
ZNF253O75346 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC12.21□□□□□ -0.45
ZNF253O75346 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC12.21□□□□□ -0.45
ZNF253O75346 AC098831.1-202ENST00000438821 336 ntBASIC12.21□□□□□ -0.45
ZNF253O75346 AC009947.1-201ENST00000444350 727 ntBASIC12.21□□□□□ -0.45
ZNF253O75346 FAAHP1-202ENST00000446499 1238 ntBASIC12.21□□□□□ -0.45
ZNF253O75346 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
ZNF253O75346 AC093909.1-201ENST00000504731 1122 ntBASIC12.21□□□□□ -0.45
ZNF253O75346 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC12.21□□□□□ -0.45
ZNF253O75346 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC12.21□□□□□ -0.45
ZNF253O75346 AC243562.2-201ENST00000561247 970 ntBASIC12.21□□□□□ -0.45
ZNF253O75346 METRN-205ENST00000568415 612 ntAPPRIS ALT2 TSL 3 BASIC12.21□□□□□ -0.45
ZNF253O75346 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 36.5 ms