Protein–RNA interactions for Protein: A6NKT7

RGPD3, RanBP2-like and GRIP domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD3A6NKT7 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 AC020910.5-201ENST00000623668 1865 ntBASIC19.04■□□□□ 0.64
RGPD3A6NKT7 LRRN4CL-201ENST00000317449 2585 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 MTHFR-217ENST00000641820 1569 ntBASIC19.04■□□□□ 0.64
RGPD3A6NKT7 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 MC3R-201ENST00000243911 1084 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 FAM27E5-201ENST00000426869 682 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 APCDD1L-AS1-206ENST00000445984 566 ntTSL 3 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 APCDD1L-AS1-208ENST00000448374 546 ntTSL 4 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 CHTF8-204ENST00000518041 567 ntTSL 2 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 LINC01569-203ENST00000573268 694 ntTSL 3 BASIC19.04■□□□□ 0.64
RGPD3A6NKT7 AL451007.2-201ENST00000632004 563 ntBASIC19.04■□□□□ 0.64
RGPD3A6NKT7 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 MIDN-206ENST00000591446 3243 ntAPPRIS P2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 TMEM40-204ENST00000435218 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 DGAT2-202ENST00000376262 2324 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 AURKB-201ENST00000316199 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 BRI3P1-201ENST00000440440 378 ntBASIC19.03■□□□□ 0.64
RGPD3A6NKT7 LINC02228-201ENST00000507600 534 ntTSL 2 BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 ZNF268-210ENST00000541211 781 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 C14orf132-204ENST00000556728 774 ntAPPRIS P1 TSL 2 BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 MESP2-203ENST00000560219 859 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 AC055811.3-201ENST00000584952 686 ntBASIC19.03■□□□□ 0.64
RGPD3A6NKT7 AC012073.1-201ENST00000606114 1108 ntBASIC19.03■□□□□ 0.64
RGPD3A6NKT7 AP000322.3-201ENST00000608665 388 ntBASIC19.03■□□□□ 0.64
RGPD3A6NKT7 KRT33A-201ENST00000007735 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
RGPD3A6NKT7 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 AP001372.2-201ENST00000526036 2493 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 IL1F10-202ENST00000393197 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 REXO1L4P-201ENST00000605109 1937 ntBASIC19.02■□□□□ 0.64
RGPD3A6NKT7 AQP7P5-201ENST00000428759 1049 ntBASIC19.02■□□□□ 0.64
RGPD3A6NKT7 AC093673.1-201ENST00000429630 648 ntTSL 2 BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 AQP7P4-201ENST00000447083 1042 ntBASIC19.02■□□□□ 0.64
RGPD3A6NKT7 AQP7P2-201ENST00000453967 1041 ntBASIC19.02■□□□□ 0.64
RGPD3A6NKT7 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 AF111169.2-201ENST00000553758 721 ntTSL 3 BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 C17orf62-216ENST00000578919 841 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 ANAPC11-221ENST00000584314 559 ntTSL 2 BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 FXYD3-204ENST00000603181 758 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 AQP7P3-201ENST00000624547 1041 ntBASIC19.02■□□□□ 0.64
RGPD3A6NKT7 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 AMHR2-201ENST00000257863 1863 ntAPPRIS P3 TSL 1 (best) BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 IL4I1-204ENST00000595948 2407 ntAPPRIS P4 TSL 1 (best) BASIC19.02■□□□□ 0.64
RGPD3A6NKT7 AC069224.1-201ENST00000566372 1715 ntBASIC19.02■□□□□ 0.63
RGPD3A6NKT7 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.63
RGPD3A6NKT7 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC19.02■□□□□ 0.63
RGPD3A6NKT7 ING4-207ENST00000446105 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC19.02■□□□□ 0.63
RGPD3A6NKT7 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 DEFB123-201ENST00000376309 467 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 RPA3-202ENST00000396682 847 ntAPPRIS P1 TSL 3 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 RNA5SP417-201ENST00000516459 108 ntBASIC19.01■□□□□ 0.63
RGPD3A6NKT7 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 SLC4A3-203ENST00000358055 4454 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 TUBB4B-201ENST00000340384 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 SELENOV-201ENST00000335426 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 SELENOV-205ENST00000622070 1704 ntTSL 5 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 CRHR1-205ENST00000352855 1146 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 C11orf49-203ENST00000378618 1166 ntTSL 5 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 MBD3L4-201ENST00000381394 775 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 LINC00278-201ENST00000425031 528 ntTSL 2 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 ZNF529-AS1-201ENST00000448373 1004 ntTSL 2 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 CICP12-201ENST00000455801 843 ntBASIC19.01■□□□□ 0.63
RGPD3A6NKT7 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC19.01■□□□□ 0.63
RGPD3A6NKT7 AC026470.1-201ENST00000478038 846 ntBASIC19.01■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 40.9 ms