Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 LITAF-209ENST00000571688 2632 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 TRPC4AP-202ENST00000451813 3138 ntTSL 2 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 GLDC-201ENST00000321612 3900 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CCDC187A0A096LP49 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 PCMTD2-207ENST00000609372 1321 ntTSL 4 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 ANKRD26P3-201ENST00000454044 2748 ntBASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 SIX5-204ENST00000622857 1401 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 CSH2-202ENST00000345366 598 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 ELK2AP-201ENST00000392510 1007 ntBASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 BLCAP-204ENST00000397135 685 ntAPPRIS P1 TSL 4 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 CNN2P10-201ENST00000443067 918 ntBASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 MIR4313-201ENST00000580760 101 ntBASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 AC016727.1-203ENST00000603199 540 ntTSL 4 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 AL021578.1-201ENST00000613646 709 ntBASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 RETN-203ENST00000629642 400 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 CES3-203ENST00000543856 3178 ntTSL 2 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 SHANK3-201ENST00000262795 7091 ntAPPRIS P5 TSL 5 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 KIFC2-201ENST00000301332 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
CCDC187A0A096LP49 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 LRRC59-203ENST00000576448 1531 ntBASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 HNRNPA1P32-201ENST00000396326 963 ntBASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 RNA5SP423-201ENST00000517127 109 ntBASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 ACTG1P17-201ENST00000558391 1119 ntBASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 COG4-212ENST00000564653 590 ntTSL 5 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 DIO1-215ENST00000610607 796 ntTSL 5 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 HSFX2-201ENST00000598963 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
CCDC187A0A096LP49 PCDHB19P-201ENST00000570871 2371 ntBASIC14.68□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms