Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 LLPH-AS1-201ENST00000510317 623 ntTSL 4 BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 AC025279.2-201ENST00000569730 653 ntBASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 AC148477.4-201ENST00000613430 1793 ntBASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 UGDH-202ENST00000501493 2826 ntTSL 2 BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 FNDC5-201ENST00000373471 2732 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC19.31■□□□□ 0.68
UBE3BQ7Z3V4 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 CARTPT-201ENST00000296777 915 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 RPL8-205ENST00000527914 551 ntTSL 3 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 AC135178.3-201ENST00000583963 531 ntTSL 4 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 FOXH1-201ENST00000377317 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 ANXA11-203ENST00000422982 2534 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 AC007787.1-201ENST00000588095 1583 ntBASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 GAS2L2-201ENST00000604063 2661 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 AL138709.1-201ENST00000614840 1693 ntBASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
UBE3BQ7Z3V4 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 AC090616.6-203ENST00000579186 1945 ntBASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 POLR1D-212ENST00000630983 1931 ntTSL 5 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 RPS9-205ENST00000402367 1617 ntTSL 3 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 SULT2B1-202ENST00000323090 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 AC026954.1-201ENST00000429771 1293 ntBASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 C2orf27AP3-201ENST00000434123 579 ntBASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 CUEDC1-207ENST00000577840 875 ntTSL 5 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 AL354718.3-201ENST00000616414 581 ntBASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 CR382287.1-201ENST00000623954 586 ntBASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 NFE2L1-214ENST00000582155 1998 ntTSL 2 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 REXO1L6P-201ENST00000603433 1515 ntBASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 RRP1-207ENST00000497547 3022 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
UBE3BQ7Z3V4 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE3BQ7Z3V4 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBE3BQ7Z3V4 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE3BQ7Z3V4 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE3BQ7Z3V4 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
UBE3BQ7Z3V4 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
UBE3BQ7Z3V4 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE3BQ7Z3V4 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE3BQ7Z3V4 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC19.28■□□□□ 0.68
UBE3BQ7Z3V4 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
UBE3BQ7Z3V4 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC19.28■□□□□ 0.68
UBE3BQ7Z3V4 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC19.28■□□□□ 0.68
UBE3BQ7Z3V4 C1orf228-219ENST00000535358 1685 ntAPPRIS P2 TSL 5 BASIC19.28■□□□□ 0.68
UBE3BQ7Z3V4 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 60.8 ms