Protein–RNA interactions for Protein: P51793

CLCN4, H(+)/Cl(-) exchange transporter 4, humanhuman

Predictions only

Length 760 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4P51793 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CLCN4P51793 AC127070.2-201ENST00000424075 555 ntTSL 2 BASIC16.29■□□□□ 0.2
CLCN4P51793 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN4P51793 AC004898.1-201ENST00000451057 766 ntBASIC16.29■□□□□ 0.2
CLCN4P51793 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC16.29■□□□□ 0.2
CLCN4P51793 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC16.29■□□□□ 0.2
CLCN4P51793 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
CLCN4P51793 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN4P51793 AC104982.3-201ENST00000581995 514 ntBASIC16.29■□□□□ 0.2
CLCN4P51793 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN4P51793 AC025181.2-201ENST00000606994 802 ntBASIC16.29■□□□□ 0.2
CLCN4P51793 AC244452.3-201ENST00000636814 210 ntBASIC16.29■□□□□ 0.2
CLCN4P51793 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLCN4P51793 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 TCOF1-206ENST00000445265 4825 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CLCN4P51793 C1orf43-202ENST00000362076 1551 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
CLCN4P51793 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN4P51793 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC16.29■□□□□ 0.2
CLCN4P51793 FRMD6-AS1-201ENST00000617151 2229 ntBASIC16.29■□□□□ 0.2
CLCN4P51793 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.29■□□□□ 0.2
CLCN4P51793 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN4P51793 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN4P51793 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.28■□□□□ 0.2
CLCN4P51793 NFATC4-208ENST00000553708 5367 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN4P51793 HYAL1-202ENST00000320295 2324 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CLCN4P51793 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.28■□□□□ 0.2
CLCN4P51793 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CLCN4P51793 SLC19A2-202ENST00000367804 2976 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN4P51793 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN4P51793 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN4P51793 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CLCN4P51793 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN4P51793 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN4P51793 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC16.28■□□□□ 0.2
CLCN4P51793 SLC25A24P2-201ENST00000415059 510 ntBASIC16.28■□□□□ 0.2
CLCN4P51793 NUS1P3-201ENST00000423502 862 ntBASIC16.28■□□□□ 0.2
CLCN4P51793 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN4P51793 IGHJ2P-201ENST00000454480 60 ntBASIC16.28■□□□□ 0.2
CLCN4P51793 AKR7A2P1-201ENST00000460134 915 ntBASIC16.28■□□□□ 0.2
CLCN4P51793 RHOQP1-201ENST00000555758 579 ntBASIC16.28■□□□□ 0.2
CLCN4P51793 KC6-205ENST00000599934 556 ntTSL 4 BASIC16.28■□□□□ 0.2
CLCN4P51793 RPS5-209ENST00000601521 1203 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CLCN4P51793 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC16.28■□□□□ 0.2
CLCN4P51793 AL096828.3-201ENST00000615354 462 ntBASIC16.28■□□□□ 0.2
CLCN4P51793 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN4P51793 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN4P51793 AL354989.2-201ENST00000435838 1540 ntBASIC16.28■□□□□ 0.2
CLCN4P51793 SHANK2-204ENST00000409530 2123 ntTSL 5 BASIC16.28■□□□□ 0.2
CLCN4P51793 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC16.28■□□□□ 0.2
CLCN4P51793 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN4P51793 NEDD1-213ENST00000557644 2367 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CLCN4P51793 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC16.28■□□□□ 0.2
CLCN4P51793 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.28■□□□□ 0.2
CLCN4P51793 FAM135A-205ENST00000418814 6415 ntTSL 5 BASIC16.27■□□□□ 0.2
CLCN4P51793 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN4P51793 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC16.27■□□□□ 0.2
CLCN4P51793 ZAP70-201ENST00000264972 2437 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN4P51793 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN4P51793 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN4P51793 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN4P51793 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC16.27■□□□□ 0.2
CLCN4P51793 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN4P51793 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN4P51793 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN4P51793 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN4P51793 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN4P51793 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCN4P51793 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC16.27■□□□□ 0.2
CLCN4P51793 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.27■□□□□ 0.2
CLCN4P51793 AC080129.2-201ENST00000418353 430 ntTSL 3 BASIC16.27■□□□□ 0.2
CLCN4P51793 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.27■□□□□ 0.2
CLCN4P51793 AC091804.1-201ENST00000486888 567 ntBASIC16.27■□□□□ 0.2
CLCN4P51793 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCN4P51793 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC16.27■□□□□ 0.2
CLCN4P51793 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC16.27■□□□□ 0.2
CLCN4P51793 AC010336.6-201ENST00000595107 528 ntTSL 4 BASIC16.27■□□□□ 0.2
CLCN4P51793 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC16.27■□□□□ 0.2
CLCN4P51793 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CLCN4P51793 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC16.27■□□□□ 0.2
CLCN4P51793 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC16.27■□□□□ 0.2
CLCN4P51793 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CLCN4P51793 PRSS30P-206ENST00000641773 873 ntBASIC16.27■□□□□ 0.2
CLCN4P51793 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CLCN4P51793 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN4P51793 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN4P51793 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN4P51793 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN4P51793 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.19
CLCN4P51793 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms