Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC17.54■□□□□ 0.4
USP11P51784 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC17.54■□□□□ 0.4
USP11P51784 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC17.54■□□□□ 0.4
USP11P51784 AC004066.1-201ENST00000502488 802 ntBASIC17.54■□□□□ 0.4
USP11P51784 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.54■□□□□ 0.4
USP11P51784 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC17.54■□□□□ 0.4
USP11P51784 AC129507.3-201ENST00000571512 913 ntTSL 2 BASIC17.54■□□□□ 0.4
USP11P51784 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC17.54■□□□□ 0.4
USP11P51784 AC012645.4-201ENST00000610691 1061 ntBASIC17.54■□□□□ 0.4
USP11P51784 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC17.54■□□□□ 0.4
USP11P51784 CU634019.7-201ENST00000624153 1185 ntBASIC17.54■□□□□ 0.4
USP11P51784 FP236241.2-201ENST00000624906 1185 ntBASIC17.54■□□□□ 0.4
USP11P51784 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC17.54■□□□□ 0.4
USP11P51784 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 STRN-202ENST00000379213 2254 ntTSL 5 BASIC17.54■□□□□ 0.4
USP11P51784 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
USP11P51784 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
USP11P51784 KRT8P44-201ENST00000441609 1350 ntBASIC17.53■□□□□ 0.4
USP11P51784 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.53■□□□□ 0.4
USP11P51784 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC17.53■□□□□ 0.4
USP11P51784 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC17.53■□□□□ 0.4
USP11P51784 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
USP11P51784 ZNF197-203ENST00000383744 1989 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 MBP-202ENST00000355994 2772 ntTSL 5 BASIC17.53■□□□□ 0.4
USP11P51784 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 AC126365.1-201ENST00000578585 1514 ntBASIC17.53■□□□□ 0.4
USP11P51784 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
USP11P51784 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
USP11P51784 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 ACKR1-201ENST00000368121 1240 ntBASIC17.53■□□□□ 0.4
USP11P51784 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
USP11P51784 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC17.53■□□□□ 0.4
USP11P51784 GAPDHP21-201ENST00000450301 1010 ntBASIC17.53■□□□□ 0.4
USP11P51784 INE1-201ENST00000456273 945 ntBASIC17.53■□□□□ 0.4
USP11P51784 RN7SL837P-201ENST00000463010 287 ntBASIC17.53■□□□□ 0.4
USP11P51784 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
USP11P51784 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC17.53■□□□□ 0.4
USP11P51784 AC067930.5-201ENST00000531730 1173 ntTSL 2 BASIC17.53■□□□□ 0.4
USP11P51784 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC17.53■□□□□ 0.4
USP11P51784 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC17.53■□□□□ 0.4
USP11P51784 INO80C-210ENST00000590757 595 ntTSL 2 BASIC17.53■□□□□ 0.4
USP11P51784 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 TOB1-202ENST00000499247 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.53■□□□□ 0.4
USP11P51784 SLC20A1-201ENST00000272542 3381 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 MST1L-201ENST00000442552 2185 ntBASIC17.53■□□□□ 0.4
USP11P51784 PRKD2-214ENST00000600194 2923 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
USP11P51784 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC17.53■□□□□ 0.4
USP11P51784 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
USP11P51784 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
USP11P51784 GSPT2-201ENST00000340438 2802 ntAPPRIS P1 BASIC17.53■□□□□ 0.4
USP11P51784 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC17.52■□□□□ 0.4
USP11P51784 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC17.52■□□□□ 0.4
USP11P51784 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC17.52■□□□□ 0.4
USP11P51784 RNASE1-202ENST00000397967 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP11P51784 AC093525.8-201ENST00000624099 1342 ntBASIC17.52■□□□□ 0.4
USP11P51784 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP11P51784 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP11P51784 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP11P51784 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC17.52■□□□□ 0.4
USP11P51784 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP11P51784 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC17.52■□□□□ 0.4
USP11P51784 KTN1-AS1-201ENST00000335142 1465 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP11P51784 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC17.52■□□□□ 0.4
USP11P51784 CEACAM19-202ENST00000403660 1982 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP11P51784 TRIM62-204ENST00000543586 1638 ntTSL 2 BASIC17.52■□□□□ 0.4
USP11P51784 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
USP11P51784 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
USP11P51784 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
USP11P51784 PPDPF-201ENST00000370177 627 ntTSL 2 BASIC17.52■□□□□ 0.4
USP11P51784 APOA1-205ENST00000375329 927 ntTSL 2 BASIC17.52■□□□□ 0.4
USP11P51784 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC17.52■□□□□ 0.4
USP11P51784 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC17.52■□□□□ 0.4
USP11P51784 AL645937.2-201ENST00000396808 931 ntBASIC17.52■□□□□ 0.4
USP11P51784 AL512384.1-201ENST00000406683 331 ntBASIC17.52■□□□□ 0.4
USP11P51784 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC17.52■□□□□ 0.4
USP11P51784 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC17.52■□□□□ 0.4
USP11P51784 GHSR-202ENST00000427970 912 ntBASIC17.52■□□□□ 0.4
USP11P51784 AL157832.1-201ENST00000428273 495 ntTSL 2 BASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms