Protein–RNA interactions for Protein: P10826

RARB, Retinoic acid receptor beta, humanhuman

Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RARBP10826 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RARBP10826 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RARBP10826 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARBP10826 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC17.38■□□□□ 0.37
RARBP10826 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RARBP10826 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC17.38■□□□□ 0.37
RARBP10826 OCEL1-201ENST00000215061 1133 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARBP10826 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARBP10826 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARBP10826 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC17.38■□□□□ 0.37
RARBP10826 CSH2-202ENST00000345366 598 ntTSL 5 BASIC17.38■□□□□ 0.37
RARBP10826 AL662890.1-201ENST00000396818 632 ntBASIC17.38■□□□□ 0.37
RARBP10826 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC17.38■□□□□ 0.37
RARBP10826 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.38■□□□□ 0.37
RARBP10826 ZSCAN32-204ENST00000422427 1267 ntTSL 2 BASIC17.38■□□□□ 0.37
RARBP10826 AL139420.1-201ENST00000439394 653 ntTSL 3 BASIC17.38■□□□□ 0.37
RARBP10826 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC17.38■□□□□ 0.37
RARBP10826 KRBOX4-206ENST00000478600 730 ntAPPRIS ALT2 TSL 2 BASIC17.38■□□□□ 0.37
RARBP10826 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC17.38■□□□□ 0.37
RARBP10826 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.38■□□□□ 0.37
RARBP10826 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC17.38■□□□□ 0.37
RARBP10826 UBL5-208ENST00000593087 320 ntTSL 3 BASIC17.38■□□□□ 0.37
RARBP10826 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC17.38■□□□□ 0.37
RARBP10826 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC17.38■□□□□ 0.37
RARBP10826 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC17.38■□□□□ 0.37
RARBP10826 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC17.38■□□□□ 0.37
RARBP10826 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARBP10826 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
RARBP10826 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC17.38■□□□□ 0.37
RARBP10826 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC17.38■□□□□ 0.37
RARBP10826 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
RARBP10826 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC17.38■□□□□ 0.37
RARBP10826 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC17.37■□□□□ 0.37
RARBP10826 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARBP10826 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RARBP10826 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC17.37■□□□□ 0.37
RARBP10826 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RARBP10826 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC17.37■□□□□ 0.37
RARBP10826 ATP6V0E2-201ENST00000421974 2605 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RARBP10826 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC17.37■□□□□ 0.37
RARBP10826 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC17.37■□□□□ 0.37
RARBP10826 GLOD4-202ENST00000301329 2059 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARBP10826 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RARBP10826 RNU1-114P-201ENST00000365297 166 ntBASIC17.37■□□□□ 0.37
RARBP10826 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC17.37■□□□□ 0.37
RARBP10826 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC17.37■□□□□ 0.37
RARBP10826 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC17.37■□□□□ 0.37
RARBP10826 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC17.37■□□□□ 0.37
RARBP10826 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RARBP10826 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC17.37■□□□□ 0.37
RARBP10826 TBCB-211ENST00000589996 724 ntTSL 3 BASIC17.37■□□□□ 0.37
RARBP10826 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC17.37■□□□□ 0.37
RARBP10826 GPR39-203ENST00000622084 900 ntTSL 5 BASIC17.37■□□□□ 0.37
RARBP10826 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARBP10826 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARBP10826 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RARBP10826 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RARBP10826 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC17.37■□□□□ 0.37
RARBP10826 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RARBP10826 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC17.37■□□□□ 0.37
RARBP10826 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARBP10826 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC17.37■□□□□ 0.37
RARBP10826 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RARBP10826 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 SLCO2B1-205ENST00000525650 2121 ntTSL 2 BASIC17.36■□□□□ 0.37
RARBP10826 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 LDB3-208ENST00000623007 1664 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 LZTS3-202ENST00000337576 4238 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
RARBP10826 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC17.36■□□□□ 0.37
RARBP10826 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC17.36■□□□□ 0.37
RARBP10826 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC17.36■□□□□ 0.37
RARBP10826 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 PIGT-201ENST00000279035 1880 ntTSL 2 BASIC17.36■□□□□ 0.37
RARBP10826 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RARBP10826 CES3-203ENST00000543856 3178 ntTSL 2 BASIC17.36■□□□□ 0.37
RARBP10826 ANAPC11-202ENST00000357385 881 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC17.36■□□□□ 0.37
RARBP10826 KNCN-202ENST00000396314 608 ntAPPRIS P3 TSL 4 BASIC17.36■□□□□ 0.37
RARBP10826 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC17.36■□□□□ 0.37
RARBP10826 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC17.36■□□□□ 0.37
RARBP10826 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 AL157392.3-216ENST00000437446 462 ntTSL 3 BASIC17.36■□□□□ 0.37
RARBP10826 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC17.36■□□□□ 0.37
RARBP10826 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
RARBP10826 SEPT7P2-209ENST00000450436 601 ntTSL 4 BASIC17.36■□□□□ 0.37
RARBP10826 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC17.36■□□□□ 0.37
RARBP10826 RERG-205ENST00000537647 935 ntTSL 2 BASIC17.36■□□□□ 0.37
RARBP10826 AC079328.1-201ENST00000560358 952 ntBASIC17.36■□□□□ 0.37
RARBP10826 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.36■□□□□ 0.37
RARBP10826 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RARBP10826 TRIM39-201ENST00000376656 3338 ntAPPRIS P4 TSL 2 BASIC17.36■□□□□ 0.37
RARBP10826 FAM184A-214ENST00000621231 4048 ntTSL 5 BASIC17.36■□□□□ 0.37
RARBP10826 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC17.36■□□□□ 0.37
RARBP10826 PRPF31-201ENST00000321030 2126 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms