Protein–RNA interactions for Protein: P09493

TPM1, Tropomyosin alpha-1 chain, humanhuman

Predictions only

Length 284 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1P09493 AC122138.1-201ENST00000508799 646 ntTSL 2 BASIC17.27■□□□□ 0.36
TPM1P09493 AC079776.4-201ENST00000511039 504 ntBASIC17.27■□□□□ 0.36
TPM1P09493 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC17.27■□□□□ 0.36
TPM1P09493 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC17.27■□□□□ 0.36
TPM1P09493 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC17.27■□□□□ 0.36
TPM1P09493 PPP1R16A-201ENST00000292539 2722 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TPM1P09493 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC17.27■□□□□ 0.36
TPM1P09493 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TPM1P09493 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM1P09493 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC17.27■□□□□ 0.35
TPM1P09493 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC17.27■□□□□ 0.35
TPM1P09493 DRC3-202ENST00000399182 1923 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TPM1P09493 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TPM1P09493 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC17.27■□□□□ 0.35
TPM1P09493 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM1P09493 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM1P09493 BIRC7-201ENST00000217169 1368 ntAPPRIS P4 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM1P09493 TATDN3-214ENST00000532324 1381 ntTSL 2 BASIC17.27■□□□□ 0.35
TPM1P09493 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM1P09493 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM1P09493 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.35
TPM1P09493 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.35
TPM1P09493 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM1P09493 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM1P09493 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM1P09493 REM2-202ENST00000536884 1331 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM1P09493 GAK-214ENST00000511163 4280 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TPM1P09493 ZMYND15-202ENST00000433935 2411 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TPM1P09493 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC17.26■□□□□ 0.35
TPM1P09493 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 IPPK-202ENST00000375522 882 ntTSL 3 BASIC17.26■□□□□ 0.35
TPM1P09493 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TPM1P09493 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM1P09493 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC17.26■□□□□ 0.35
TPM1P09493 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.26■□□□□ 0.35
TPM1P09493 AC087276.3-201ENST00000526220 787 ntTSL 3 BASIC17.26■□□□□ 0.35
TPM1P09493 CALM3-211ENST00000598871 561 ntTSL 4 BASIC17.26■□□□□ 0.35
TPM1P09493 AL049840.3-201ENST00000602669 611 ntBASIC17.26■□□□□ 0.35
TPM1P09493 AC068137.2-201ENST00000605408 478 ntBASIC17.26■□□□□ 0.35
TPM1P09493 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC17.26■□□□□ 0.35
TPM1P09493 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC17.26■□□□□ 0.35
TPM1P09493 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
TPM1P09493 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC17.26■□□□□ 0.35
TPM1P09493 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM1P09493 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC17.26■□□□□ 0.35
TPM1P09493 HDAC11-201ENST00000295757 2960 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC17.26■□□□□ 0.35
TPM1P09493 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TPM1P09493 ITSN1-210ENST00000399353 3913 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 SPIN3-204ENST00000638257 4835 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TPM1P09493 NFATC3-203ENST00000349223 6328 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TPM1P09493 WASHC2A-203ENST00000351071 4642 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 SEMA4F-202ENST00000357877 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC17.25■□□□□ 0.35
TPM1P09493 GPANK1-203ENST00000375896 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC17.25■□□□□ 0.35
TPM1P09493 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 KIRREL1-204ENST00000368173 7519 ntTSL 2 BASIC17.25■□□□□ 0.35
TPM1P09493 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.25■□□□□ 0.35
TPM1P09493 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC17.25■□□□□ 0.35
TPM1P09493 RABIF-201ENST00000367262 2430 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 AC005912.2-201ENST00000619492 2400 ntBASIC17.25■□□□□ 0.35
TPM1P09493 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
TPM1P09493 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.25■□□□□ 0.35
TPM1P09493 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC17.25■□□□□ 0.35
TPM1P09493 PPIE-208ENST00000470213 927 ntTSL 3 BASIC17.25■□□□□ 0.35
TPM1P09493 CCDC74BP1-201ENST00000508880 1123 ntBASIC17.25■□□□□ 0.35
TPM1P09493 SMN2-210ENST00000511812 867 ntTSL 2 BASIC17.25■□□□□ 0.35
TPM1P09493 RNA5SP410-201ENST00000516285 106 ntBASIC17.25■□□□□ 0.35
TPM1P09493 KRT19P2-202ENST00000557173 1012 ntBASIC17.25■□□□□ 0.35
TPM1P09493 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.25■□□□□ 0.35
TPM1P09493 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.25■□□□□ 0.35
TPM1P09493 AL031008.1-201ENST00000619963 541 ntBASIC17.25■□□□□ 0.35
TPM1P09493 SAFB-205ENST00000588852 2842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
TPM1P09493 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC17.25■□□□□ 0.35
TPM1P09493 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC17.25■□□□□ 0.35
TPM1P09493 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC17.25■□□□□ 0.35
TPM1P09493 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms