Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 LITAF-210ENST00000571976 548 ntTSL 2 BASIC15.43■□□□□ 0.06
CAPN1P07384 LITAF-214ENST00000574703 486 ntTSL 2 BASIC15.43■□□□□ 0.06
CAPN1P07384 PRR29-209ENST00000582540 967 ntTSL 2 BASIC15.43■□□□□ 0.06
CAPN1P07384 RN7SL828P-201ENST00000607615 303 ntBASIC15.43■□□□□ 0.06
CAPN1P07384 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC15.43■□□□□ 0.06
CAPN1P07384 HGNC:18790-211ENST00000621129 1483 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN1P07384 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC15.43■□□□□ 0.06
CAPN1P07384 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN1P07384 AC006058.4-201ENST00000624016 1670 ntBASIC15.43■□□□□ 0.06
CAPN1P07384 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN1P07384 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN1P07384 GRM1-201ENST00000282753 6622 ntAPPRIS P3 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN1P07384 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
CAPN1P07384 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN1P07384 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN1P07384 TNFRSF10A-201ENST00000221132 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN1P07384 TNRC18P2-201ENST00000417666 2714 ntBASIC15.43■□□□□ 0.06
CAPN1P07384 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.43■□□□□ 0.06
CAPN1P07384 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC15.43■□□□□ 0.06
CAPN1P07384 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC15.43■□□□□ 0.06
CAPN1P07384 C4A-259ENST00000498271 5269 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN1P07384 MRGPRX3-201ENST00000396275 1639 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN1P07384 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC15.43■□□□□ 0.06
CAPN1P07384 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN1P07384 MKRN3-203ENST00000568252 1312 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
CAPN1P07384 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC15.42■□□□□ 0.06
CAPN1P07384 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 FAM215B-201ENST00000458392 2183 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.42■□□□□ 0.06
CAPN1P07384 AQP1-201ENST00000311813 2913 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.42■□□□□ 0.06
CAPN1P07384 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 CYP4F24P-201ENST00000586049 1580 ntBASIC15.42■□□□□ 0.06
CAPN1P07384 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 SPAG6-201ENST00000313311 2421 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 UNC13B-203ENST00000396787 5293 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CAPN1P07384 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.42■□□□□ 0.06
CAPN1P07384 AC068580.4-201ENST00000636615 2228 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CAPN1P07384 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 AC015922.1-201ENST00000421102 1152 ntBASIC15.42■□□□□ 0.06
CAPN1P07384 AL353705.2-201ENST00000428243 662 ntBASIC15.42■□□□□ 0.06
CAPN1P07384 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.42■□□□□ 0.06
CAPN1P07384 PNKD-204ENST00000436005 978 ntTSL 5 BASIC15.42■□□□□ 0.06
CAPN1P07384 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 MPI-209ENST00000564003 1195 ntTSL 2 BASIC15.42■□□□□ 0.06
CAPN1P07384 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC15.42■□□□□ 0.06
CAPN1P07384 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.42■□□□□ 0.06
CAPN1P07384 AL133215.2-201ENST00000609242 977 ntBASIC15.42■□□□□ 0.06
CAPN1P07384 AL359644.1-202ENST00000637541 571 ntTSL 3 BASIC15.42■□□□□ 0.06
CAPN1P07384 HAUS2-211ENST00000639412 375 ntTSL 2 BASIC15.42■□□□□ 0.06
CAPN1P07384 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.42■□□□□ 0.06
CAPN1P07384 FLAD1-205ENST00000368431 1803 ntTSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.42■□□□□ 0.06
CAPN1P07384 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC15.42■□□□□ 0.06
CAPN1P07384 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC15.42■□□□□ 0.06
CAPN1P07384 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC15.42■□□□□ 0.06
CAPN1P07384 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.42■□□□□ 0.06
CAPN1P07384 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC15.41■□□□□ 0.06
CAPN1P07384 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC15.41■□□□□ 0.06
CAPN1P07384 ELP4-219ENST00000639878 1583 ntTSL 5 BASIC15.41■□□□□ 0.06
CAPN1P07384 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC15.41■□□□□ 0.06
CAPN1P07384 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 FAM160B1-203ENST00000369250 2870 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 RAC2-202ENST00000401529 569 ntTSL 4 BASIC15.41■□□□□ 0.06
CAPN1P07384 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 AL139010.1-201ENST00000454878 894 ntBASIC15.41■□□□□ 0.06
CAPN1P07384 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC15.41■□□□□ 0.06
CAPN1P07384 SERBP1P5-201ENST00000510079 1181 ntBASIC15.41■□□□□ 0.06
CAPN1P07384 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC15.41■□□□□ 0.06
CAPN1P07384 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.41■□□□□ 0.06
CAPN1P07384 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC15.41■□□□□ 0.06
CAPN1P07384 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.41■□□□□ 0.06
CAPN1P07384 AC105021.1-202ENST00000570572 669 ntBASIC15.41■□□□□ 0.06
CAPN1P07384 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.41■□□□□ 0.06
CAPN1P07384 AF228730.6-201ENST00000641497 218 ntBASIC15.41■□□□□ 0.06
CAPN1P07384 AC084121.3-201ENST00000641716 218 ntBASIC15.41■□□□□ 0.06
CAPN1P07384 AC105233.6-201ENST00000642093 218 ntBASIC15.41■□□□□ 0.06
CAPN1P07384 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.41■□□□□ 0.06
CAPN1P07384 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC15.41■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms