Protein–RNA interactions for Protein: P04436

T-cell receptor alpha chain V region HPB-MLT (Fragment), humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P04436 RAP1GAP2-209ENST00000637138 3175 ntTSL 5 BASIC14.23□□□□□ -0.13
P04436 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04436 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04436 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.23□□□□□ -0.13
P04436 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04436 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04436 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
P04436 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04436 NME7-201ENST00000367811 1642 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04436 MXI1-202ENST00000332674 3470 ntAPPRIS P4 TSL 1 (best) BASIC14.23□□□□□ -0.13
P04436 C16orf58-201ENST00000327237 2793 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
P04436 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
P04436 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.22□□□□□ -0.13
P04436 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC14.22□□□□□ -0.13
P04436 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 PCDHA3-202ENST00000532566 4594 ntBASIC14.22□□□□□ -0.13
P04436 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
P04436 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.22□□□□□ -0.13
P04436 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 SQSTM1-213ENST00000510187 1714 ntTSL 5 BASIC14.22□□□□□ -0.13
P04436 ALG5-201ENST00000239891 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 MGST3-203ENST00000367885 680 ntTSL 2 BASIC14.22□□□□□ -0.13
P04436 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
P04436 AC244107.1-201ENST00000442033 332 ntBASIC14.22□□□□□ -0.13
P04436 FKBP11-203ENST00000453172 959 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
P04436 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.22□□□□□ -0.13
P04436 TDH-203ENST00000531764 1110 ntBASIC14.22□□□□□ -0.13
P04436 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC14.22□□□□□ -0.13
P04436 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC14.22□□□□□ -0.13
P04436 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.22□□□□□ -0.13
P04436 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.22□□□□□ -0.13
P04436 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.22□□□□□ -0.13
P04436 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.22□□□□□ -0.13
P04436 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC14.22□□□□□ -0.13
P04436 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC14.22□□□□□ -0.13
P04436 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC14.22□□□□□ -0.13
P04436 EIF2B3-201ENST00000360403 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 NR4A3-201ENST00000330847 4982 ntAPPRIS P4 TSL 5 BASIC14.22□□□□□ -0.13
P04436 LAT2-204ENST00000398475 2453 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 DRD5P1-201ENST00000456605 1438 ntBASIC14.22□□□□□ -0.13
P04436 AC127383.1-201ENST00000444697 1800 ntBASIC14.22□□□□□ -0.13
P04436 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
P04436 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
P04436 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC14.22□□□□□ -0.13
P04436 PSMG3-AS1-201ENST00000437621 5701 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
P04436 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 AP005117.1-202ENST00000581724 1908 ntBASIC14.21□□□□□ -0.13
P04436 FBXO41-201ENST00000295133 6928 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.21□□□□□ -0.13
P04436 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC14.21□□□□□ -0.13
P04436 GPR161-204ENST00000367838 2676 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC14.21□□□□□ -0.13
P04436 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC14.21□□□□□ -0.13
P04436 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 DFNA5-202ENST00000409775 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
P04436 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC14.21□□□□□ -0.13
P04436 LITAF-201ENST00000339430 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC14.21□□□□□ -0.13
P04436 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 ACTG1P3-201ENST00000431775 1114 ntBASIC14.21□□□□□ -0.13
P04436 AC099754.1-201ENST00000435884 454 ntTSL 3 BASIC14.21□□□□□ -0.13
P04436 AC026410.3-201ENST00000514280 936 ntBASIC14.21□□□□□ -0.13
P04436 ACRV1-202ENST00000527795 782 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
P04436 PTP4A1P2-201ENST00000546033 454 ntBASIC14.21□□□□□ -0.13
P04436 AC009486.1-201ENST00000569860 813 ntBASIC14.21□□□□□ -0.13
P04436 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.21□□□□□ -0.13
P04436 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC14.21□□□□□ -0.13
P04436 AC107373.2-201ENST00000607735 490 ntBASIC14.21□□□□□ -0.13
P04436 AL162274.1-201ENST00000617191 1098 ntBASIC14.21□□□□□ -0.13
P04436 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
P04436 LOX-206ENST00000639739 1626 ntTSL 5 BASIC14.21□□□□□ -0.13
P04436 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC14.21□□□□□ -0.13
P04436 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 POLL-217ENST00000628479 1953 ntTSL 5 BASIC14.21□□□□□ -0.13
P04436 RAD23B-201ENST00000358015 4119 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 BCS1L-205ENST00000412366 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC14.21□□□□□ -0.13
P04436 MYH6-201ENST00000356287 5871 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
P04436 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms