Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC16.64■□□□□ 0.25
O00370 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC16.64■□□□□ 0.25
O00370 TSPY16P-201ENST00000449843 468 ntBASIC16.64■□□□□ 0.25
O00370 SLC35B4-204ENST00000470969 1033 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 SERBP1P5-201ENST00000510079 1181 ntBASIC16.64■□□□□ 0.25
O00370 TPGS2-215ENST00000590842 1239 ntTSL 2 BASIC16.64■□□□□ 0.25
O00370 AL391069.4-201ENST00000609583 481 ntBASIC16.64■□□□□ 0.25
O00370 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 AC087481.3-201ENST00000602886 1894 ntBASIC16.64■□□□□ 0.25
O00370 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 EPS8L2-223ENST00000533256 3266 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.25
O00370 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 LINC01136-203ENST00000457348 2539 ntTSL 2 BASIC16.64■□□□□ 0.25
O00370 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC16.64■□□□□ 0.25
O00370 TMBIM7P-203ENST00000641617 1718 ntBASIC16.64■□□□□ 0.25
O00370 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
O00370 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC16.64■□□□□ 0.25
O00370 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC16.64■□□□□ 0.25
O00370 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC16.64■□□□□ 0.25
O00370 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 SLC2A4-204ENST00000571308 1768 ntTSL 5 BASIC16.64■□□□□ 0.25
O00370 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 STAC3-206ENST00000554578 1580 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
O00370 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
O00370 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC16.63■□□□□ 0.25
O00370 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
O00370 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
O00370 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC16.63■□□□□ 0.25
O00370 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC16.63■□□□□ 0.25
O00370 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
O00370 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
O00370 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
O00370 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
O00370 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.63■□□□□ 0.25
O00370 SPTLC1P1-201ENST00000447199 261 ntBASIC16.63■□□□□ 0.25
O00370 MEIS3P1-201ENST00000495167 958 ntBASIC16.63■□□□□ 0.25
O00370 DOC2GP-202ENST00000514950 1163 ntBASIC16.63■□□□□ 0.25
O00370 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.63■□□□□ 0.25
O00370 LITAF-218ENST00000576036 603 ntAPPRIS P1 TSL 4 BASIC16.63■□□□□ 0.25
O00370 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC16.63■□□□□ 0.25
O00370 AL158212.4-201ENST00000624062 1286 ntBASIC16.63■□□□□ 0.25
O00370 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.63■□□□□ 0.25
O00370 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
O00370 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
O00370 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
O00370 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
O00370 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
O00370 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
O00370 ZNF687-201ENST00000324048 5378 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
O00370 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
O00370 AP000439.3-201ENST00000545202 2376 ntTSL 2 BASIC16.63■□□□□ 0.25
O00370 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC16.63■□□□□ 0.25
O00370 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
O00370 TPO-203ENST00000346956 2923 ntTSL 5 BASIC16.63■□□□□ 0.25
O00370 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
O00370 PDGFRL-203ENST00000541323 1905 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
O00370 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.62■□□□□ 0.25
O00370 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
O00370 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC16.62■□□□□ 0.25
O00370 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
O00370 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
O00370 ETV5-206ENST00000434744 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
O00370 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
O00370 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
O00370 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
O00370 RAPSN-203ENST00000524487 1462 ntTSL 5 BASIC16.62■□□□□ 0.25
O00370 AC138969.3-201ENST00000546612 1459 ntBASIC16.62■□□□□ 0.25
O00370 AC138932.2-201ENST00000548268 1459 ntBASIC16.62■□□□□ 0.25
O00370 AC126755.4-201ENST00000549796 1459 ntBASIC16.62■□□□□ 0.25
O00370 SGK3-211ENST00000522398 3106 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
O00370 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
O00370 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
O00370 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
O00370 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
O00370 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC16.62■□□□□ 0.25
O00370 FAM207CP-201ENST00000443486 507 ntBASIC16.62■□□□□ 0.25
O00370 GNAQP1-201ENST00000444815 1067 ntBASIC16.62■□□□□ 0.25
O00370 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC16.62■□□□□ 0.25
O00370 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
O00370 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
O00370 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.62■□□□□ 0.25
O00370 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC16.62■□□□□ 0.25
O00370 AC015910.1-201ENST00000579400 975 ntBASIC16.62■□□□□ 0.25
O00370 RN7SL204P-201ENST00000582831 262 ntBASIC16.62■□□□□ 0.25
O00370 AC009118.2-201ENST00000613275 655 ntBASIC16.62■□□□□ 0.25
O00370 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
O00370 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
O00370 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC16.62■□□□□ 0.25
O00370 IGHA1-202ENST00000641837 1310 ntAPPRIS P5 BASIC16.62■□□□□ 0.25
O00370 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
O00370 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
O00370 C18orf15-201ENST00000623680 2534 ntBASIC16.62■□□□□ 0.25
O00370 PXN-201ENST00000228307 3785 ntAPPRIS P4 TSL 1 (best) BASIC16.62■□□□□ 0.25
O00370 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 26 ms