Protein–RNA interactions for Protein: Q9Y4M8

LINC00588, Putative uncharacterized protein encoded by LINC00588, humanhuman

Predictions only

Length 146 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00588Q9Y4M8 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 SLC25A4-201ENST00000281456 4440 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 AC092850.2-201ENST00000623821 2697 ntBASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 HPCAL1-202ENST00000381765 1904 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 SOD1-201ENST00000270142 966 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 MIR658-201ENST00000385210 100 ntBASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 RPL28-203ENST00000428193 573 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 RPL28-204ENST00000431533 590 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 CROCCP4-201ENST00000457096 498 ntBASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 C19orf24-202ENST00000469144 668 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 AC068587.3-201ENST00000526613 355 ntBASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 AC021054.1-202ENST00000543884 599 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 RPL28-207ENST00000558815 616 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 AC010491.1-203ENST00000564167 638 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 AP001063.1-201ENST00000568332 529 ntBASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 TBCB-211ENST00000589996 724 ntTSL 3 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 AL022328.1-201ENST00000610050 478 ntBASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 AC005252.2-201ENST00000624630 1141 ntBASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 DOC2GP-204ENST00000639052 2548 ntBASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 MLPH-204ENST00000410032 2171 ntAPPRIS ALT2 TSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 C21orf33-202ENST00000348499 1506 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 CAAP1-206ENST00000625311 1532 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 TCAF2P1-201ENST00000291129 2421 ntBASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 USE1-206ENST00000595101 1776 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 SLC3A2-208ENST00000536981 1486 ntTSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 EIF4G1-202ENST00000346169 5516 ntAPPRIS P3 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 ARVCF-201ENST00000263207 4041 ntAPPRIS P2 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC10.67□□□□□ -0.7
LINC00588Q9Y4M8 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 FBXO18-201ENST00000362091 3560 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 RUNDC3B-202ENST00000338056 4099 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 AC127383.1-201ENST00000444697 1800 ntBASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 TRPM2-AS-202ENST00000456880 2056 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 TEX30-203ENST00000376022 828 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 BOLA2P3-201ENST00000404566 256 ntBASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 MIR1909-201ENST00000411312 80 ntBASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 BAATP1-201ENST00000412284 1225 ntBASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC10.66□□□□□ -0.7
LINC00588Q9Y4M8 AL355864.2-201ENST00000447420 863 ntBASIC10.66□□□□□ -0.7
Retrieved 100 of 98,524 protein–RNA pairs in 11.1 ms