Protein–RNA interactions for Protein: Q9Y3P4

RHBDD3, Rhomboid domain-containing protein 3, humanhuman

Predictions only

Length 386 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3Q9Y3P4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 OR52W1-201ENST00000311352 1114 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 AC211486.1-202ENST00000416371 468 ntBASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 AC211476.1-201ENST00000503899 468 ntBASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 MAGEA8-204ENST00000535454 2112 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 PPP1R14B-203ENST00000542235 920 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 AC018653.3-201ENST00000544657 749 ntTSL 3 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 AC026979.3-201ENST00000607315 403 ntBASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 HADH-212ENST00000638621 741 ntTSL 5 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 PPOX-201ENST00000352210 1686 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 TBCD-202ENST00000539345 3975 ntTSL 5 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 NWD2-201ENST00000309447 8325 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 CYP4F24P-201ENST00000586049 1580 ntBASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 AC005264.1-201ENST00000587587 2319 ntTSL 2 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 CALR-201ENST00000316448 1903 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 PITPNM2-201ENST00000280562 6785 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
RHBDD3Q9Y3P4 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 KRT8-215ENST00000552150 1687 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 GSN-203ENST00000373808 2664 ntTSL 2 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 FBXL19-204ENST00000471231 3641 ntTSL 2 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 KIAA1468-202ENST00000398130 6178 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 AP4E1-201ENST00000261842 6758 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 CENPM-201ENST00000215980 966 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 PRSS55-201ENST00000328655 1124 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 CD81-202ENST00000381036 880 ntTSL 3 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 RBPMS2P1-201ENST00000437762 623 ntBASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 COQ9-214ENST00000567933 882 ntTSL 3 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 LINC01978-202ENST00000574526 1540 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 PITPNM1-216ENST00000534749 4189 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 PCYOX1-201ENST00000264441 2959 ntTSL 5 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 ABHD11-201ENST00000222800 1483 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 DNAJC7-201ENST00000316603 1468 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 ARIH2-205ENST00000449376 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
RHBDD3Q9Y3P4 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RHBDD3Q9Y3P4 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC13.72□□□□□ -0.21
RHBDD3Q9Y3P4 PNPLA3-203ENST00000423180 2222 ntTSL 2 BASIC13.72□□□□□ -0.21
RHBDD3Q9Y3P4 CICP23-201ENST00000605013 2741 ntBASIC13.72□□□□□ -0.21
RHBDD3Q9Y3P4 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RHBDD3Q9Y3P4 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
RHBDD3Q9Y3P4 LINC01101-201ENST00000622953 1884 ntBASIC13.72□□□□□ -0.21
RHBDD3Q9Y3P4 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
RHBDD3Q9Y3P4 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC13.72□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 61.9 ms