Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 INTS4P2-202ENST00000614726 2019 ntBASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
SSX2IPQ9Y2D8 USHBP1-203ENST00000431146 2136 ntTSL 2 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 AL513523.2-202ENST00000427283 2040 ntBASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 CELF4-221ENST00000601019 1836 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 DUSP13-210ENST00000491677 1770 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 TMEM222-210ENST00000608611 1511 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 AC005229.1-201ENST00000392885 409 ntBASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 PQLC3-202ENST00000402361 696 ntTSL 2 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 AC136604.1-201ENST00000418535 575 ntBASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 LNCPRESS1-201ENST00000429254 756 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 Z94721.1-201ENST00000444102 385 ntTSL 5 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 CROCCP4-201ENST00000457096 498 ntBASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 AC022494.1-201ENST00000466044 728 ntBASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 AC092658.1-201ENST00000505836 891 ntBASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 AC009486.1-201ENST00000569860 813 ntBASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 MIR4259-201ENST00000584466 101 ntBASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 FP565260.6-205ENST00000624120 898 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 AC100861.1-202ENST00000500853 1970 ntTSL 2 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 MFSD4A-207ENST00000536357 1841 ntTSL 2 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
SSX2IPQ9Y2D8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 DENND4C-209ENST00000602925 6831 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 TK2-221ENST00000620035 5060 ntTSL 2 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 NNAT-202ENST00000346199 1209 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 STX1A-203ENST00000395155 783 ntTSL 2 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 AP001056.1-201ENST00000411956 821 ntTSL 3 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 ROPN1-207ENST00000484329 566 ntTSL 3 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 AC108134.3-202ENST00000571404 1207 ntTSL 5 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 DUSP13-212ENST00000605915 1015 ntTSL 5 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 RPS24-214ENST00000613865 538 ntTSL 5 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 AC006449.3-201ENST00000620144 563 ntTSL 4 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 GNAO1-202ENST00000262494 5767 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 ABCC10-201ENST00000244533 5088 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
SSX2IPQ9Y2D8 AL035685.1-202ENST00000637341 1688 ntTSL 5 BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms