Protein–RNA interactions for Protein: Q9UBK2

PPARGC1A, Peroxisome proliferator-activated receptor gamma coactivator 1-alpha, humanhuman

Known RBP Predictions only

Length 798 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPARGC1AQ9UBK2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 MIR600HG-201ENST00000449175 5984 ntBASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 AHSA1-201ENST00000216479 1402 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 DEPDC7-202ENST00000311388 2012 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 DOK5-202ENST00000395939 1453 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 LRRC57-202ENST00000397130 2384 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 EFHD1-202ENST00000409613 1156 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 AC074338.1-201ENST00000416825 156 ntBASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 RAD18-204ENST00000418463 563 ntTSL 4 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 RAD18-205ENST00000421052 582 ntTSL 3 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 AL160313.1-201ENST00000502101 1039 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 CXCL6-203ENST00000515050 557 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 AC018716.2-201ENST00000528390 2597 ntTSL 2 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 WARS-232ENST00000556645 2508 ntTSL 5 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 AC004840.1-201ENST00000636359 365 ntBASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 ATP6AP2-217ENST00000636580 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 PRRT2-214ENST00000637064 2153 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 SLC35F2-204ENST00000525815 3170 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 TAS1R1-201ENST00000333172 2892 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PPARGC1AQ9UBK2 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 CYP2R1-207ENST00000532378 1746 ntTSL 5 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 RAD51D-218ENST00000590016 1528 ntTSL 2 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 AGER-204ENST00000375067 1250 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 ZMYND10-AS1-201ENST00000440013 250 ntTSL 3 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 REEP4-207ENST00000523293 913 ntTSL 3 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 RAB35-202ENST00000534951 939 ntTSL 2 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 AP000943.3-201ENST00000536540 954 ntTSL 3 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 AC092337.1-201ENST00000568699 1129 ntBASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 OPA1-208ENST00000392438 6340 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 OSBPL6-203ENST00000357080 2217 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 GOLGA7B-201ENST00000370602 6447 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 LFNG-204ENST00000402045 2058 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 RER1-209ENST00000605895 3044 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 DNAJC21-202ENST00000382021 6208 ntTSL 2 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 TOPAZ1-201ENST00000309765 5334 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC16.31■□□□□ 0.2
PPARGC1AQ9UBK2 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 PITPNM2-202ENST00000320201 6736 ntAPPRIS P3 TSL 5 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 MGEA5-201ENST00000357797 3263 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 NUTM2D-202ENST00000412718 5543 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
PPARGC1AQ9UBK2 RPL13P2-201ENST00000440687 659 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms