Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 AL139082.1-201ENST00000613982 3433 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 AP4M1-205ENST00000422582 1814 ntTSL 2 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 BRAP-201ENST00000327551 1947 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 DNAJC22-201ENST00000395069 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 AC005089.1-201ENST00000619486 2241 ntBASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC14.29□□□□□ -0.12
RSPO3Q9BXY4 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 TUBB3P1-201ENST00000405796 1332 ntBASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 TSEN15P1-201ENST00000423257 515 ntBASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 CALM3-212ENST00000599839 1355 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 AC139530.3-201ENST00000620344 690 ntBASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 AKAP7-204ENST00000431975 2954 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
RSPO3Q9BXY4 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.27□□□□□ -0.12
RSPO3Q9BXY4 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RSPO3Q9BXY4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.27□□□□□ -0.12
RSPO3Q9BXY4 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC14.27□□□□□ -0.12
RSPO3Q9BXY4 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.27□□□□□ -0.12
RSPO3Q9BXY4 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RSPO3Q9BXY4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC14.27□□□□□ -0.12
RSPO3Q9BXY4 ATXN10-202ENST00000381061 3135 ntTSL 2 BASIC14.27□□□□□ -0.12
RSPO3Q9BXY4 GTF2H2C-210ENST00000510979 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
RSPO3Q9BXY4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
RSPO3Q9BXY4 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 TSSK5P-201ENST00000423978 907 ntBASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 TEX48-201ENST00000436752 708 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 TMEM120A-203ENST00000439537 1161 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 OST4-203ENST00000456793 561 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 NAALADL1-208ENST00000528884 973 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 TMEM120B-206ENST00000540377 962 ntTSL 3 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 AC011467.4-201ENST00000594891 528 ntBASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 AL391069.4-201ENST00000609583 481 ntBASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 TEX48-202ENST00000612244 662 ntTSL 3 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC14.27□□□□□ -0.13
RSPO3Q9BXY4 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC14.27□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms