Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 ARHGEF26-AS1-201ENST00000467912 628 ntTSL 3 BASIC16.77■□□□□ 0.28
SNX27Q96L92 AC093904.1-201ENST00000474561 455 ntTSL 3 BASIC16.77■□□□□ 0.28
SNX27Q96L92 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.28
SNX27Q96L92 CCKBR-202ENST00000525014 792 ntTSL 4 BASIC16.77■□□□□ 0.28
SNX27Q96L92 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC16.77■□□□□ 0.28
SNX27Q96L92 SLC25A47P1-201ENST00000531577 414 ntBASIC16.77■□□□□ 0.28
SNX27Q96L92 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC16.77■□□□□ 0.28
SNX27Q96L92 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC16.77■□□□□ 0.28
SNX27Q96L92 AC009486.1-201ENST00000569860 813 ntBASIC16.77■□□□□ 0.28
SNX27Q96L92 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC16.77■□□□□ 0.28
SNX27Q96L92 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.77■□□□□ 0.28
SNX27Q96L92 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX27Q96L92 ATF5-205ENST00000600336 682 ntTSL 2 BASIC16.77■□□□□ 0.28
SNX27Q96L92 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX27Q96L92 C7orf49-201ENST00000393114 1482 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SNX27Q96L92 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC16.77■□□□□ 0.28
SNX27Q96L92 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNX27Q96L92 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNX27Q96L92 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SNX27Q96L92 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
SNX27Q96L92 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.77■□□□□ 0.27
SNX27Q96L92 RASSF6-202ENST00000335049 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
SNX27Q96L92 ALDOA-225ENST00000569545 1359 ntAPPRIS P2 TSL 5 BASIC16.77■□□□□ 0.27
SNX27Q96L92 AC018665.1-201ENST00000622927 1362 ntBASIC16.77■□□□□ 0.27
SNX27Q96L92 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 MSTO2P-201ENST00000314835 1709 ntBASIC16.76■□□□□ 0.27
SNX27Q96L92 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.76■□□□□ 0.27
SNX27Q96L92 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 AC105250.1-201ENST00000509378 2057 ntBASIC16.76■□□□□ 0.27
SNX27Q96L92 AAMP-201ENST00000248450 1886 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC16.76■□□□□ 0.27
SNX27Q96L92 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC16.76■□□□□ 0.27
SNX27Q96L92 AATBC-203ENST00000448247 1889 ntTSL 2 BASIC16.76■□□□□ 0.27
SNX27Q96L92 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 AL138799.1-201ENST00000448213 1675 ntBASIC16.76■□□□□ 0.27
SNX27Q96L92 NFE2-203ENST00000540264 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC16.76■□□□□ 0.27
SNX27Q96L92 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.76■□□□□ 0.27
SNX27Q96L92 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 KRTAP1-4-201ENST00000377747 408 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
SNX27Q96L92 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.76■□□□□ 0.27
SNX27Q96L92 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.76■□□□□ 0.27
SNX27Q96L92 LBH-202ENST00000401506 485 ntTSL 3 BASIC16.76■□□□□ 0.27
SNX27Q96L92 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.76■□□□□ 0.27
SNX27Q96L92 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC16.76■□□□□ 0.27
SNX27Q96L92 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 AC018685.1-201ENST00000457813 368 ntTSL 3 BASIC16.76■□□□□ 0.27
SNX27Q96L92 AC093433.1-201ENST00000458048 571 ntBASIC16.76■□□□□ 0.27
SNX27Q96L92 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 PFN2-205ENST00000461868 613 ntTSL 2 BASIC16.76■□□□□ 0.27
SNX27Q96L92 AP001582.1-201ENST00000525856 295 ntBASIC16.76■□□□□ 0.27
SNX27Q96L92 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC16.76■□□□□ 0.27
SNX27Q96L92 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.76■□□□□ 0.27
SNX27Q96L92 PTP4A1P2-201ENST00000546033 454 ntBASIC16.76■□□□□ 0.27
SNX27Q96L92 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC16.76■□□□□ 0.27
SNX27Q96L92 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC16.76■□□□□ 0.27
SNX27Q96L92 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC16.76■□□□□ 0.27
SNX27Q96L92 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC16.76■□□□□ 0.27
SNX27Q96L92 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 WRAP53-202ENST00000396463 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
SNX27Q96L92 PIAS3-201ENST00000369298 2761 ntTSL 5 BASIC16.76■□□□□ 0.27
SNX27Q96L92 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SNX27Q96L92 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
SNX27Q96L92 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
SNX27Q96L92 DNAJC16-201ENST00000375838 2357 ntTSL 5 BASIC16.75■□□□□ 0.27
SNX27Q96L92 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.75■□□□□ 0.27
SNX27Q96L92 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.75■□□□□ 0.27
SNX27Q96L92 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
SNX27Q96L92 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
SNX27Q96L92 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.75■□□□□ 0.27
SNX27Q96L92 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC16.75■□□□□ 0.27
SNX27Q96L92 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC16.75■□□□□ 0.27
SNX27Q96L92 CROCCP4-201ENST00000457096 498 ntBASIC16.75■□□□□ 0.27
SNX27Q96L92 AP001889.1-201ENST00000525414 633 ntBASIC16.75■□□□□ 0.27
SNX27Q96L92 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 TROAP-207ENST00000548311 623 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
SNX27Q96L92 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC16.75■□□□□ 0.27
SNX27Q96L92 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC16.75■□□□□ 0.27
SNX27Q96L92 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.75■□□□□ 0.27
SNX27Q96L92 YIF1B-216ENST00000592694 1181 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
SNX27Q96L92 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
SNX27Q96L92 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC16.75■□□□□ 0.27
SNX27Q96L92 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.75■□□□□ 0.27
SNX27Q96L92 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 78.8 ms