Protein–RNA interactions for Protein: Q96CF2

CHMP4C, Charged multivesicular body protein 4c, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4CQ96CF2 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 C1R-202ENST00000536053 2347 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 GRN-214ENST00000589265 1632 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 KRTAP6-3-201ENST00000391624 636 ntAPPRIS P1 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 PTK7-212ENST00000476760 902 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 WASH4P-201ENST00000564273 1246 ntBASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 COX11-202ENST00000571584 1108 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 AL035252.4-201ENST00000624174 288 ntBASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 SLC9A7-205ENST00000616978 10024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 SNAP47-AS1-201ENST00000413347 1708 ntTSL 2 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 GLMP-213ENST00000612353 1365 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 GLMP-215ENST00000622703 1364 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 AP1M2-207ENST00000590923 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 ASAH1-240ENST00000636997 1774 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 MBD1-202ENST00000269471 2980 ntAPPRIS ALT2 TSL 5 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 AC100803.3-201ENST00000606664 2961 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 SSR4P1-203ENST00000599569 2260 ntBASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
CHMP4CQ96CF2 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC18.64■□□□□ 0.58
CHMP4CQ96CF2 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP4CQ96CF2 AC126755.1-201ENST00000525846 6405 ntBASIC18.64■□□□□ 0.58
CHMP4CQ96CF2 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP4CQ96CF2 NDUFS2-201ENST00000367993 2042 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP4CQ96CF2 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
CHMP4CQ96CF2 ANKK1-201ENST00000303941 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 AC105250.1-201ENST00000509378 2057 ntBASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 PBX3-204ENST00000373489 2775 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 FO393414.2-201ENST00000405153 598 ntBASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 AL033519.3-201ENST00000450618 595 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 API5-211ENST00000534695 560 ntTSL 5 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 SUOX-214ENST00000551841 906 ntTSL 3 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 VAT1-205ENST00000587173 1174 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 SRD5A3P1-201ENST00000603021 949 ntBASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 CECR7-204ENST00000609932 568 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 FAM174A-201ENST00000312637 1356 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 DGAT1-206ENST00000528718 3711 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC18.64■□□□□ 0.57
CHMP4CQ96CF2 AC023824.1-201ENST00000562945 2975 ntBASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 ZNF131-214ENST00000509634 3340 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 SLC9A7P1-201ENST00000554295 3311 ntBASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 AP002414.2-201ENST00000591780 3365 ntBASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 NDRG2-209ENST00000397853 2079 ntAPPRIS P4 TSL 2 BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 EVA1A-203ENST00000410010 696 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 KRT18P64-201ENST00000434946 1219 ntBASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 CD81-207ENST00000481687 890 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 SDHAP3-202ENST00000515467 728 ntBASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 CFL1-212ENST00000531413 636 ntTSL 3 BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 MIR4313-201ENST00000580760 101 ntBASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
CHMP4CQ96CF2 AC025048.3-201ENST00000590609 569 ntBASIC18.63■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms