Protein–RNA interactions for Protein: Q709C8

VPS13C, Vacuolar protein sorting-associated protein 13C, humanhuman

Predictions only

Length 3,753 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13CQ709C8 PES1-204ENST00000402284 2144 ntTSL 5 BASIC12.71□□□□□ -0.38
VPS13CQ709C8 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC12.71□□□□□ -0.38
VPS13CQ709C8 FGD4-212ENST00000534526 2977 ntTSL 5 BASIC12.71□□□□□ -0.38
VPS13CQ709C8 TPM3P8-201ENST00000330554 643 ntBASIC12.71□□□□□ -0.38
VPS13CQ709C8 TCEAL6-201ENST00000372773 983 ntAPPRIS P1 TSL 3 BASIC12.71□□□□□ -0.38
VPS13CQ709C8 AC073094.1-201ENST00000453798 433 ntTSL 2 BASIC12.71□□□□□ -0.38
VPS13CQ709C8 NDUFS6P1-201ENST00000485187 316 ntBASIC12.71□□□□□ -0.38
VPS13CQ709C8 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
VPS13CQ709C8 MYADM-202ENST00000391768 1492 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS13CQ709C8 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC12.71□□□□□ -0.38
VPS13CQ709C8 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.38
VPS13CQ709C8 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 TMCO5B-205ENST00000530020 894 ntBASIC12.7□□□□□ -0.38
VPS13CQ709C8 AC100778.2-201ENST00000580150 483 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 AL606763.1-201ENST00000629535 462 ntTSL 3 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 HSPB7-204ENST00000411503 2128 ntAPPRIS ALT1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 CLUHP2-201ENST00000426660 1303 ntBASIC12.7□□□□□ -0.38
VPS13CQ709C8 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 AC015909.3-201ENST00000572855 1794 ntBASIC12.7□□□□□ -0.38
VPS13CQ709C8 JKAMP-215ENST00000616435 2338 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 PAUPAR-201ENST00000630360 2965 ntBASIC12.7□□□□□ -0.38
VPS13CQ709C8 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 ACTBP8-201ENST00000403258 1108 ntBASIC12.7□□□□□ -0.38
VPS13CQ709C8 POM121L8P-201ENST00000417732 1281 ntBASIC12.7□□□□□ -0.38
VPS13CQ709C8 POM121L9P-203ENST00000441984 1285 ntBASIC12.7□□□□□ -0.38
VPS13CQ709C8 AC098935.1-201ENST00000446057 611 ntBASIC12.7□□□□□ -0.38
VPS13CQ709C8 RNMTL1P1-201ENST00000454103 560 ntBASIC12.7□□□□□ -0.38
VPS13CQ709C8 IGHV3-37-201ENST00000518544 340 ntBASIC12.7□□□□□ -0.38
VPS13CQ709C8 SIRT3-210ENST00000529382 1225 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 AC087045.2-201ENST00000606279 1003 ntBASIC12.7□□□□□ -0.38
VPS13CQ709C8 DIO1-215ENST00000610607 796 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 AC109460.1-201ENST00000567209 1478 ntTSL 3 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 ARL8B-201ENST00000256496 3005 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC12.7□□□□□ -0.38
VPS13CQ709C8 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
VPS13CQ709C8 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 ZNF581-203ENST00000587252 1324 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 MIR4754-201ENST00000582477 89 ntBASIC12.69□□□□□ -0.38
VPS13CQ709C8 AC079336.4-201ENST00000584219 408 ntTSL 2 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 AC127024.7-201ENST00000625101 200 ntBASIC12.69□□□□□ -0.38
VPS13CQ709C8 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 CCNYL1-201ENST00000295414 3767 ntTSL 5 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 IDS-203ENST00000428056 1213 ntTSL 2 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 AC019193.1-201ENST00000506678 823 ntBASIC12.69□□□□□ -0.38
VPS13CQ709C8 AHNAK-205ENST00000530124 701 ntAPPRIS ALT2 TSL 3 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 SNORD3B-2-202ENST00000571722 791 ntBASIC12.69□□□□□ -0.38
VPS13CQ709C8 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 GDE1-201ENST00000353258 2958 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC12.69□□□□□ -0.38
VPS13CQ709C8 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
VPS13CQ709C8 NAA60-203ENST00000414063 2619 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms