Protein–RNA interactions for Protein: Q6ZUS6

CCDC149, Coiled-coil domain-containing protein 149, humanhuman

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC149Q6ZUS6 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 HIST1H2AH-201ENST00000377459 387 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 AC017104.1-201ENST00000415129 720 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 DGCR5-204ENST00000440005 1299 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 HIRIP3-204ENST00000564026 988 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 PRKN-211ENST00000615065 261 ntTSL 5 BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 AC132938.4-201ENST00000623835 848 ntBASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 AC069281.2-201ENST00000485071 4401 ntTSL 2 BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 HPSE-206ENST00000512196 1571 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 AC069224.1-201ENST00000566372 1715 ntBASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 AC018695.7-201ENST00000624587 2492 ntBASIC16.33■□□□□ 0.2
CCDC149Q6ZUS6 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 TEX29-201ENST00000283547 709 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 BTBD6P1-201ENST00000412176 1267 ntBASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 NUS1P3-201ENST00000423502 862 ntBASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 FAM197Y7-201ENST00000432892 766 ntBASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 IGHJ2P-201ENST00000454480 60 ntBASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 EYA2-208ENST00000497062 2384 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 PFN2-215ENST00000497148 743 ntTSL 4 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 ZNF346-202ENST00000503039 2774 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 AC145423.3-201ENST00000615987 467 ntBASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 AC046158.3-201ENST00000624947 2558 ntBASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 PKP4-AS1-203ENST00000629904 1951 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 AC244452.3-201ENST00000636814 210 ntBASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 NKILA-202ENST00000614771 2598 ntBASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
CCDC149Q6ZUS6 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 COLEC11-209ENST00000418971 1595 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 POLR3H-202ENST00000355209 4416 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 AC006001.1-201ENST00000325130 474 ntBASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 TNFAIP8L2-201ENST00000368910 1178 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 ELK2AP-201ENST00000392510 1007 ntBASIC16.31■□□□□ 0.2
CCDC149Q6ZUS6 AC053503.1-201ENST00000429882 519 ntTSL 3 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 69.7 ms