Protein–RNA interactions for Protein: P56539

CAV3, Caveolin-3, humanhuman

Predictions only

Length 151 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAV3P56539 NRDC-201ENST00000352171 3691 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAV3P56539 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAV3P56539 NRAS-201ENST00000369535 4449 ntAPPRIS P1 TSL 1 (best) BASIC14.03□□□□□ -0.16
CAV3P56539 USP19-205ENST00000398898 4474 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CAV3P56539 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CAV3P56539 TCAIM-201ENST00000342649 3687 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAV3P56539 MAGIX-208ENST00000616266 3295 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CAV3P56539 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CAV3P56539 GPANK1-205ENST00000375906 2793 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.16
CAV3P56539 ZNF706-201ENST00000311212 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAV3P56539 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC14.02□□□□□ -0.16
CAV3P56539 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC14.02□□□□□ -0.16
CAV3P56539 FOXRED1-201ENST00000263578 1970 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAV3P56539 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAV3P56539 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC14.02□□□□□ -0.16
CAV3P56539 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.02□□□□□ -0.16
CAV3P56539 IL11RA-202ENST00000441545 1700 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.16
CAV3P56539 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CAV3P56539 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC14.02□□□□□ -0.16
CAV3P56539 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC14.02□□□□□ -0.16
CAV3P56539 AC012569.1-201ENST00000591191 1524 ntBASIC14.02□□□□□ -0.16
CAV3P56539 HSD17B7P2-202ENST00000494540 1401 ntTSL 1 (best) BASIC14.02□□□□□ -0.16
CAV3P56539 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAV3P56539 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CAV3P56539 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.02□□□□□ -0.17
CAV3P56539 CD99-202ENST00000381180 530 ntTSL 2 BASIC14.02□□□□□ -0.17
CAV3P56539 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CAV3P56539 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC14.02□□□□□ -0.17
CAV3P56539 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC14.02□□□□□ -0.17
CAV3P56539 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC14.02□□□□□ -0.17
CAV3P56539 HS6ST1P1-201ENST00000481504 1234 ntBASIC14.02□□□□□ -0.17
CAV3P56539 RNA5SP416-201ENST00000516838 111 ntBASIC14.02□□□□□ -0.17
CAV3P56539 POLD4-207ENST00000531239 584 ntTSL 2 BASIC14.02□□□□□ -0.17
CAV3P56539 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC14.02□□□□□ -0.17
CAV3P56539 CYB561-216ENST00000582297 897 ntTSL 3 BASIC14.02□□□□□ -0.17
CAV3P56539 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC14.02□□□□□ -0.17
CAV3P56539 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAV3P56539 TTLL10-AS1-201ENST00000379317 3532 ntTSL 2 BASIC14.02□□□□□ -0.17
CAV3P56539 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAV3P56539 ADRB2-201ENST00000305988 3443 ntAPPRIS P1 BASIC14.02□□□□□ -0.17
CAV3P56539 AC138969.2-201ENST00000532739 9932 ntBASIC14.02□□□□□ -0.17
CAV3P56539 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC14.02□□□□□ -0.17
CAV3P56539 NPFFR1-201ENST00000277942 8921 ntAPPRIS P1 TSL 5 BASIC14.02□□□□□ -0.17
CAV3P56539 NKIRAS2-201ENST00000307641 2948 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAV3P56539 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC14.02□□□□□ -0.17
CAV3P56539 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAV3P56539 AL158154.2-201ENST00000585776 2208 ntTSL 2 BASIC14.02□□□□□ -0.17
CAV3P56539 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAV3P56539 TANK-202ENST00000392749 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAV3P56539 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAV3P56539 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.02□□□□□ -0.17
CAV3P56539 BIRC2-214ENST00000621637 3331 ntTSL 5 BASIC14.02□□□□□ -0.17
CAV3P56539 MBNL1-205ENST00000355460 5941 ntAPPRIS ALT1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAV3P56539 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAV3P56539 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.02□□□□□ -0.17
CAV3P56539 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.02□□□□□ -0.17
CAV3P56539 INTS4P1-202ENST00000587624 2985 ntTSL 5 BASIC14.01□□□□□ -0.17
CAV3P56539 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CAV3P56539 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC14.01□□□□□ -0.17
CAV3P56539 KDM2B-205ENST00000536437 2762 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 RNF123-202ENST00000432042 2670 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CAV3P56539 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
CAV3P56539 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 CD8A-203ENST00000409511 3048 ntAPPRIS P4 TSL 2 BASIC14.01□□□□□ -0.17
CAV3P56539 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
CAV3P56539 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 IGLL3P-201ENST00000412472 434 ntBASIC14.01□□□□□ -0.17
CAV3P56539 MED15P5-201ENST00000423150 992 ntBASIC14.01□□□□□ -0.17
CAV3P56539 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC14.01□□□□□ -0.17
CAV3P56539 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC14.01□□□□□ -0.17
CAV3P56539 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC14.01□□□□□ -0.17
CAV3P56539 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 KRT18P58-201ENST00000527480 1120 ntBASIC14.01□□□□□ -0.17
CAV3P56539 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.01□□□□□ -0.17
CAV3P56539 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14.01□□□□□ -0.17
CAV3P56539 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC14.01□□□□□ -0.17
CAV3P56539 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC14.01□□□□□ -0.17
CAV3P56539 ACTL9-202ENST00000612068 1252 ntBASIC14.01□□□□□ -0.17
CAV3P56539 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC14.01□□□□□ -0.17
CAV3P56539 SHISA5-210ENST00000444115 2081 ntTSL 2 BASIC14.01□□□□□ -0.17
CAV3P56539 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.01□□□□□ -0.17
CAV3P56539 AC104836.1-202ENST00000636805 6041 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CAV3P56539 OXTR-201ENST00000316793 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 APBB1IP-202ENST00000376236 2771 ntAPPRIS P1 TSL 5 BASIC14.01□□□□□ -0.17
CAV3P56539 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 HSDL2-202ENST00000398805 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 PDPK1-201ENST00000268673 4728 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 HNF4G-201ENST00000354370 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
CAV3P56539 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 60.4 ms