Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 STK33-217ENST00000534493 1895 ntTSL 2 BASIC13.93□□□□□ -0.18
GFRA1P56159 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
GFRA1P56159 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 RUFY2-205ENST00000454950 2613 ntTSL 2 BASIC13.93□□□□□ -0.18
GFRA1P56159 CD8A-201ENST00000283635 2873 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
GFRA1P56159 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
GFRA1P56159 MXD4-201ENST00000337190 4056 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC13.92□□□□□ -0.18
GFRA1P56159 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC13.92□□□□□ -0.18
GFRA1P56159 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
GFRA1P56159 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC13.92□□□□□ -0.18
GFRA1P56159 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.92□□□□□ -0.18
GFRA1P56159 AC093433.1-201ENST00000458048 571 ntBASIC13.92□□□□□ -0.18
GFRA1P56159 FAM104B-207ENST00000489298 712 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
GFRA1P56159 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.92□□□□□ -0.18
GFRA1P56159 AC068587.3-201ENST00000526613 355 ntBASIC13.92□□□□□ -0.18
GFRA1P56159 SLC25A47P1-201ENST00000531577 414 ntBASIC13.92□□□□□ -0.18
GFRA1P56159 KRT17P8-201ENST00000540749 863 ntBASIC13.92□□□□□ -0.18
GFRA1P56159 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.92□□□□□ -0.18
GFRA1P56159 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC13.92□□□□□ -0.18
GFRA1P56159 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC13.92□□□□□ -0.18
GFRA1P56159 AC233724.13-201ENST00000598383 410 ntBASIC13.92□□□□□ -0.18
GFRA1P56159 ATF5-205ENST00000600336 682 ntTSL 2 BASIC13.92□□□□□ -0.18
GFRA1P56159 HPSE2-205ENST00000614306 447 ntTSL 5 BASIC13.92□□□□□ -0.18
GFRA1P56159 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
GFRA1P56159 AC020658.6-201ENST00000623564 1870 ntBASIC13.92□□□□□ -0.18
GFRA1P56159 PIKFYVE-202ENST00000308862 1640 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC13.92□□□□□ -0.18
GFRA1P56159 PCDHA12-201ENST00000398631 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 NR2E3-202ENST00000617575 1998 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC13.92□□□□□ -0.18
GFRA1P56159 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 AC007950.2-201ENST00000615045 2347 ntBASIC13.92□□□□□ -0.18
GFRA1P56159 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 C2CD4C-201ENST00000332235 3129 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
GFRA1P56159 SUSD4-202ENST00000343846 3480 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
GFRA1P56159 RXRA-202ENST00000481739 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
GFRA1P56159 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC13.91□□□□□ -0.18
GFRA1P56159 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC13.91□□□□□ -0.18
GFRA1P56159 LAP3-211ENST00000618908 2100 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GFRA1P56159 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC13.91□□□□□ -0.18
GFRA1P56159 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GFRA1P56159 ZNF772-202ENST00000356584 1799 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
GFRA1P56159 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GFRA1P56159 MSTO2P-201ENST00000314835 1709 ntBASIC13.91□□□□□ -0.18
GFRA1P56159 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.91□□□□□ -0.18
GFRA1P56159 FAM169B-201ENST00000332908 579 ntAPPRIS P1 TSL 5 BASIC13.91□□□□□ -0.18
GFRA1P56159 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.91□□□□□ -0.18
GFRA1P56159 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GFRA1P56159 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC13.91□□□□□ -0.18
GFRA1P56159 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
GFRA1P56159 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GFRA1P56159 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.91□□□□□ -0.18
GFRA1P56159 AC005229.1-201ENST00000392885 409 ntBASIC13.91□□□□□ -0.18
GFRA1P56159 BAATP1-201ENST00000412284 1225 ntBASIC13.91□□□□□ -0.18
GFRA1P56159 LINC01759-201ENST00000412639 985 ntTSL 3 BASIC13.91□□□□□ -0.18
GFRA1P56159 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC13.91□□□□□ -0.18
GFRA1P56159 COPS6-202ENST00000418625 1107 ntAPPRIS ALT2 TSL 5 BASIC13.91□□□□□ -0.18
GFRA1P56159 AC112492.5-201ENST00000421897 457 ntBASIC13.91□□□□□ -0.18
GFRA1P56159 Z98749.2-201ENST00000428294 700 ntTSL 5 BASIC13.91□□□□□ -0.18
GFRA1P56159 AC012441.1-201ENST00000446669 685 ntBASIC13.91□□□□□ -0.18
GFRA1P56159 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC13.91□□□□□ -0.18
GFRA1P56159 AC022137.2-201ENST00000503482 481 ntBASIC13.91□□□□□ -0.18
GFRA1P56159 AP001582.1-201ENST00000525856 295 ntBASIC13.91□□□□□ -0.18
GFRA1P56159 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GFRA1P56159 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC13.91□□□□□ -0.18
GFRA1P56159 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.91□□□□□ -0.18
GFRA1P56159 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC13.91□□□□□ -0.18
GFRA1P56159 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC13.91□□□□□ -0.18
GFRA1P56159 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GFRA1P56159 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GFRA1P56159 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GFRA1P56159 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GFRA1P56159 TCF25-201ENST00000263346 2233 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GFRA1P56159 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC13.91□□□□□ -0.18
GFRA1P56159 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
GFRA1P56159 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC13.91□□□□□ -0.18
GFRA1P56159 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
GFRA1P56159 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC13.91□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms