Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC25A1P53007 AL079307.3-201ENST00000556114 283 ntBASIC13.89□□□□□ -0.19
SLC25A1P53007 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC13.89□□□□□ -0.19
SLC25A1P53007 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC25A1P53007 AC015910.1-201ENST00000579400 975 ntBASIC13.89□□□□□ -0.19
SLC25A1P53007 MIR4469-201ENST00000583919 79 ntBASIC13.89□□□□□ -0.19
SLC25A1P53007 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SLC25A1P53007 RAB34-224ENST00000636513 888 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC25A1P53007 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 SESN1-202ENST00000356644 2676 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 ZNF575-202ENST00000458714 2285 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC25A1P53007 RPTOR-203ENST00000570891 2286 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 MYOZ1-201ENST00000359322 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 CDPF1-204ENST00000404744 1541 ntTSL 3 BASIC13.89□□□□□ -0.19
SLC25A1P53007 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC25A1P53007 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC13.89□□□□□ -0.19
SLC25A1P53007 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC25A1P53007 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SLC25A1P53007 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC13.89□□□□□ -0.19
SLC25A1P53007 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC13.89□□□□□ -0.19
SLC25A1P53007 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC13.88□□□□□ -0.19
SLC25A1P53007 WNT16-201ENST00000222462 3147 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SLC25A1P53007 CICP11-201ENST00000434745 2827 ntBASIC13.88□□□□□ -0.19
SLC25A1P53007 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC25A1P53007 PCDHA3-202ENST00000532566 4594 ntBASIC13.88□□□□□ -0.19
SLC25A1P53007 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC25A1P53007 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC13.88□□□□□ -0.19
SLC25A1P53007 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 AC074338.1-201ENST00000416825 156 ntBASIC13.88□□□□□ -0.19
SLC25A1P53007 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC25A1P53007 CALML4-206ENST00000467889 987 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 AC106872.10-201ENST00000503778 747 ntTSL 3 BASIC13.88□□□□□ -0.19
SLC25A1P53007 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SLC25A1P53007 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC25A1P53007 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC25A1P53007 AC007193.2-201ENST00000596807 472 ntTSL 3 BASIC13.88□□□□□ -0.19
SLC25A1P53007 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 AC004835.2-201ENST00000603762 682 ntBASIC13.88□□□□□ -0.19
SLC25A1P53007 MIR6069-201ENST00000620069 79 ntBASIC13.88□□□□□ -0.19
SLC25A1P53007 HOTTIP_1.1-201ENST00000620415 57 ntBASIC13.88□□□□□ -0.19
SLC25A1P53007 AC009093.7-201ENST00000623853 1223 ntBASIC13.88□□□□□ -0.19
SLC25A1P53007 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.88□□□□□ -0.19
SLC25A1P53007 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC25A1P53007 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC25A1P53007 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 Z97205.2-201ENST00000564697 1639 ntBASIC13.88□□□□□ -0.19
SLC25A1P53007 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
SLC25A1P53007 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC25A1P53007 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC13.88□□□□□ -0.19
SLC25A1P53007 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SLC25A1P53007 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SLC25A1P53007 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC25A1P53007 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC25A1P53007 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SLC25A1P53007 CCDC183-AS1-201ENST00000414656 2386 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC25A1P53007 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SLC25A1P53007 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC13.88□□□□□ -0.19
SLC25A1P53007 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.88□□□□□ -0.19
SLC25A1P53007 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SLC25A1P53007 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
SLC25A1P53007 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 CYP4F11-203ENST00000402119 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.87□□□□□ -0.19
SLC25A1P53007 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 FLJ16779-201ENST00000612722 7638 ntBASIC13.87□□□□□ -0.19
SLC25A1P53007 VGLL2-202ENST00000352536 1709 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC13.87□□□□□ -0.19
SLC25A1P53007 ACE3P-201ENST00000423435 1973 ntBASIC13.87□□□□□ -0.19
SLC25A1P53007 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
SLC25A1P53007 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC13.87□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 1156.6 ms