Protein–RNA interactions for Protein: P48169

GABRA4, Gamma-aminobutyric acid receptor subunit alpha-4, humanhuman

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABRA4P48169 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.72□□□□□ -0.05
GABRA4P48169 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
GABRA4P48169 AL162727.3-201ENST00000635661 2787 ntBASIC14.72□□□□□ -0.05
GABRA4P48169 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 HLA-DQB2-231ENST00000435145 2026 ntBASIC14.72□□□□□ -0.05
GABRA4P48169 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC14.72□□□□□ -0.05
GABRA4P48169 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 RPL5P21-201ENST00000404620 815 ntBASIC14.72□□□□□ -0.05
GABRA4P48169 AC106760.1-201ENST00000508690 800 ntBASIC14.72□□□□□ -0.05
GABRA4P48169 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC14.72□□□□□ -0.05
GABRA4P48169 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC14.72□□□□□ -0.05
GABRA4P48169 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.72□□□□□ -0.05
GABRA4P48169 AC010503.1-201ENST00000596027 520 ntTSL 5 BASIC14.72□□□□□ -0.05
GABRA4P48169 AL359881.2-201ENST00000602973 570 ntBASIC14.72□□□□□ -0.05
GABRA4P48169 AC017083.2-201ENST00000608069 979 ntBASIC14.72□□□□□ -0.05
GABRA4P48169 FAM171B-202ENST00000612606 940 ntTSL 5 BASIC14.72□□□□□ -0.05
GABRA4P48169 PRAL-201ENST00000624952 3286 ntBASIC14.72□□□□□ -0.05
GABRA4P48169 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
GABRA4P48169 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 TPRX1-201ENST00000322175 1924 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC14.72□□□□□ -0.05
GABRA4P48169 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 DHPS-201ENST00000210060 1363 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC14.72□□□□□ -0.05
GABRA4P48169 TBCEL-205ENST00000529397 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC14.72□□□□□ -0.05
GABRA4P48169 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
GABRA4P48169 NRSN2-210ENST00000621012 1852 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
GABRA4P48169 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABRA4P48169 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABRA4P48169 AHDC1-202ENST00000374011 6438 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
GABRA4P48169 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABRA4P48169 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.71□□□□□ -0.05
GABRA4P48169 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
GABRA4P48169 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GABRA4P48169 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC14.71□□□□□ -0.05
GABRA4P48169 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.71□□□□□ -0.05
GABRA4P48169 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GABRA4P48169 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABRA4P48169 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABRA4P48169 LAPTM4A-201ENST00000175091 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABRA4P48169 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABRA4P48169 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GABRA4P48169 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GABRA4P48169 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC14.71□□□□□ -0.05
GABRA4P48169 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC14.71□□□□□ -0.05
GABRA4P48169 AC104457.1-201ENST00000401024 814 ntBASIC14.71□□□□□ -0.05
GABRA4P48169 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABRA4P48169 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC14.71□□□□□ -0.05
GABRA4P48169 AC244107.1-201ENST00000442033 332 ntBASIC14.71□□□□□ -0.05
GABRA4P48169 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.71□□□□□ -0.05
GABRA4P48169 BCRP2-202ENST00000447763 634 ntBASIC14.71□□□□□ -0.05
GABRA4P48169 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC14.71□□□□□ -0.05
GABRA4P48169 BCRP6-201ENST00000510112 632 ntBASIC14.71□□□□□ -0.05
GABRA4P48169 BCRP7-201ENST00000511549 544 ntBASIC14.71□□□□□ -0.05
GABRA4P48169 AC136475.3-203ENST00000525217 617 ntTSL 2 BASIC14.71□□□□□ -0.05
GABRA4P48169 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
GABRA4P48169 AL118558.1-202ENST00000557242 451 ntTSL 3 BASIC14.71□□□□□ -0.05
GABRA4P48169 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC14.71□□□□□ -0.05
GABRA4P48169 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.71□□□□□ -0.05
GABRA4P48169 GNRHR2-203ENST00000581100 1187 ntBASIC14.71□□□□□ -0.05
GABRA4P48169 MIR4259-201ENST00000584466 101 ntBASIC14.71□□□□□ -0.05
GABRA4P48169 AL022328.1-201ENST00000610050 478 ntBASIC14.71□□□□□ -0.05
GABRA4P48169 AP005019.2-201ENST00000615104 511 ntBASIC14.71□□□□□ -0.05
GABRA4P48169 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
GABRA4P48169 MIR6775-201ENST00000617557 69 ntBASIC14.71□□□□□ -0.05
GABRA4P48169 SLC25A2-201ENST00000239451 1417 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
GABRA4P48169 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC14.71□□□□□ -0.05
GABRA4P48169 AC092850.2-201ENST00000623821 2697 ntBASIC14.71□□□□□ -0.05
GABRA4P48169 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABRA4P48169 TXNDC11-201ENST00000283033 3140 ntAPPRIS P3 TSL 2 BASIC14.71□□□□□ -0.05
GABRA4P48169 FAM118B-210ENST00000627851 1862 ntTSL 5 BASIC14.71□□□□□ -0.05
GABRA4P48169 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
GABRA4P48169 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC14.71□□□□□ -0.05
GABRA4P48169 PMS1-212ENST00000432292 3234 ntTSL 2 BASIC14.71□□□□□ -0.06
GABRA4P48169 NHEG1-202ENST00000432330 1357 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
GABRA4P48169 FLJ16779-201ENST00000612722 7638 ntBASIC14.71□□□□□ -0.06
GABRA4P48169 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
GABRA4P48169 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
GABRA4P48169 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC14.71□□□□□ -0.06
GABRA4P48169 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.7□□□□□ -0.06
GABRA4P48169 ZBTB46-201ENST00000245663 5185 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
GABRA4P48169 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC14.7□□□□□ -0.06
GABRA4P48169 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 LAD1-201ENST00000367313 2336 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC14.7□□□□□ -0.06
GABRA4P48169 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC14.7□□□□□ -0.06
GABRA4P48169 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
GABRA4P48169 PCDHA3-201ENST00000522353 5260 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
GABRA4P48169 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms