Protein–RNA interactions for Protein: P18847

ATF3, Cyclic AMP-dependent transcription factor ATF-3, humanhuman

Predictions only

Length 181 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3P18847 SUMO1-204ENST00000409181 784 ntTSL 3 BASIC21.08■□□□□ 0.97
ATF3P18847 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATF3P18847 SUMO1-207ENST00000409498 779 ntTSL 3 BASIC21.08■□□□□ 0.97
ATF3P18847 KIAA1614-AS1-201ENST00000415647 1440 ntTSL 2 BASIC21.08■□□□□ 0.97
ATF3P18847 SIAH2-AS1-201ENST00000461943 441 ntTSL 4 BASIC21.08■□□□□ 0.97
ATF3P18847 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATF3P18847 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC21.08■□□□□ 0.97
ATF3P18847 AP002803.1-201ENST00000528836 498 ntBASIC21.08■□□□□ 0.97
ATF3P18847 LGALS3-204ENST00000554715 916 ntTSL 3 BASIC21.08■□□□□ 0.97
ATF3P18847 AP001094.4-201ENST00000579008 2176 ntBASIC21.08■□□□□ 0.97
ATF3P18847 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
ATF3P18847 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC21.08■□□□□ 0.97
ATF3P18847 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
ATF3P18847 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC21.08■□□□□ 0.96
ATF3P18847 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATF3P18847 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ATF3P18847 MFSD11-220ENST00000621483 2850 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATF3P18847 FKBP4P6-201ENST00000457486 1332 ntBASIC21.07■□□□□ 0.96
ATF3P18847 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATF3P18847 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
ATF3P18847 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATF3P18847 AL133373.2-201ENST00000623187 2828 ntBASIC21.07■□□□□ 0.96
ATF3P18847 CLCNKB-201ENST00000375667 2129 ntTSL 2 BASIC21.07■□□□□ 0.96
ATF3P18847 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
ATF3P18847 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATF3P18847 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC21.07■□□□□ 0.96
ATF3P18847 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATF3P18847 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC21.07■□□□□ 0.96
ATF3P18847 AC012360.1-201ENST00000433219 674 ntTSL 5 BASIC21.07■□□□□ 0.96
ATF3P18847 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC21.07■□□□□ 0.96
ATF3P18847 AC079112.1-201ENST00000454972 939 ntBASIC21.07■□□□□ 0.96
ATF3P18847 AC009779.1-201ENST00000551138 283 ntBASIC21.07■□□□□ 0.96
ATF3P18847 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC21.07■□□□□ 0.96
ATF3P18847 AL031713.1-201ENST00000564813 661 ntBASIC21.07■□□□□ 0.96
ATF3P18847 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC21.07■□□□□ 0.96
ATF3P18847 AC004466.1-201ENST00000599515 1080 ntBASIC21.07■□□□□ 0.96
ATF3P18847 ITGA9-AS1-213ENST00000614028 913 ntTSL 5 BASIC21.07■□□□□ 0.96
ATF3P18847 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC21.07■□□□□ 0.96
ATF3P18847 AL590644.3-201ENST00000635428 1228 ntTSL 5 BASIC21.07■□□□□ 0.96
ATF3P18847 SETD3-202ENST00000331768 2878 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATF3P18847 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC21.07■□□□□ 0.96
ATF3P18847 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATF3P18847 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC21.07■□□□□ 0.96
ATF3P18847 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
ATF3P18847 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATF3P18847 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
ATF3P18847 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATF3P18847 KLK11-207ENST00000594768 1347 ntAPPRIS P4 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATF3P18847 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATF3P18847 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC21.06■□□□□ 0.96
ATF3P18847 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC21.06■□□□□ 0.96
ATF3P18847 AP000593.2-201ENST00000542775 1433 ntBASIC21.06■□□□□ 0.96
ATF3P18847 SCGN-203ENST00000612225 1402 ntTSL 5 BASIC21.06■□□□□ 0.96
ATF3P18847 LINC01667-202ENST00000623919 1422 ntTSL 5 BASIC21.06■□□□□ 0.96
ATF3P18847 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
ATF3P18847 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATF3P18847 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATF3P18847 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATF3P18847 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATF3P18847 AC245369.1-201ENST00000390634 434 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ATF3P18847 CHCHD2-201ENST00000395422 901 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATF3P18847 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATF3P18847 TMEM220-AS1-207ENST00000584714 541 ntTSL 4 BASIC21.06■□□□□ 0.96
ATF3P18847 HIST1H3C-201ENST00000612966 411 ntAPPRIS P1 BASIC21.06■□□□□ 0.96
ATF3P18847 TMEM179-205ENST00000615704 636 ntTSL 2 BASIC21.06■□□□□ 0.96
ATF3P18847 AC242376.2-201ENST00000619355 883 ntBASIC21.06■□□□□ 0.96
ATF3P18847 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATF3P18847 ADAM23-201ENST00000264377 6330 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATF3P18847 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC21.06■□□□□ 0.96
ATF3P18847 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
ATF3P18847 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
ATF3P18847 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC21.05■□□□□ 0.96
ATF3P18847 AL022326.1-201ENST00000434516 1778 ntTSL 2 BASIC21.05■□□□□ 0.96
ATF3P18847 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC21.05■□□□□ 0.96
ATF3P18847 PHF20L1-203ENST00000337920 2311 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ATF3P18847 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC21.05■□□□□ 0.96
ATF3P18847 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 IL23A-201ENST00000228534 1046 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC21.05■□□□□ 0.96
ATF3P18847 FAM227B-210ENST00000560246 911 ntAPPRIS ALT2 TSL 3 BASIC21.05■□□□□ 0.96
ATF3P18847 AC141586.1-203ENST00000567242 366 ntBASIC21.05■□□□□ 0.96
ATF3P18847 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC21.05■□□□□ 0.96
ATF3P18847 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC21.05■□□□□ 0.96
ATF3P18847 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC21.05■□□□□ 0.96
ATF3P18847 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC21.05■□□□□ 0.96
ATF3P18847 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
ATF3P18847 FOXO4-201ENST00000341558 1353 ntTSL 5 BASIC21.05■□□□□ 0.96
ATF3P18847 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC21.05■□□□□ 0.96
ATF3P18847 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
ATF3P18847 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC21.05■□□□□ 0.96
ATF3P18847 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 32 ms