Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 SEPT11-206ENST00000505788 2079 ntAPPRIS ALT1 TSL 5 BASIC16.82■□□□□ 0.28
CHRNA1P02708 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHRNA1P02708 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CHRNA1P02708 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
CHRNA1P02708 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CHRNA1P02708 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA1P02708 PIPOX-201ENST00000323372 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 AC025165.1-201ENST00000356672 2355 ntTSL 5 BASIC16.81■□□□□ 0.28
CHRNA1P02708 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 KRT8P14-201ENST00000414254 1442 ntBASIC16.81■□□□□ 0.28
CHRNA1P02708 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHRNA1P02708 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 MCF2L-203ENST00000375604 6445 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CHRNA1P02708 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA1P02708 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC16.81■□□□□ 0.28
CHRNA1P02708 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHRNA1P02708 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC16.81■□□□□ 0.28
CHRNA1P02708 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHRNA1P02708 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.81■□□□□ 0.28
CHRNA1P02708 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.81■□□□□ 0.28
CHRNA1P02708 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC16.81■□□□□ 0.28
CHRNA1P02708 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA1P02708 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC16.81■□□□□ 0.28
CHRNA1P02708 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHRNA1P02708 Metazoa_SRP.166-201ENST00000612530 253 ntBASIC16.81■□□□□ 0.28
CHRNA1P02708 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHRNA1P02708 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.81■□□□□ 0.28
CHRNA1P02708 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 TK2-207ENST00000544898 3441 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC16.81■□□□□ 0.28
CHRNA1P02708 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
CHRNA1P02708 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CHRNA1P02708 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC16.81■□□□□ 0.28
CHRNA1P02708 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CHRNA1P02708 AC018735.1-201ENST00000437208 1502 ntBASIC16.8■□□□□ 0.28
CHRNA1P02708 CISH-201ENST00000348721 2043 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNA1P02708 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC16.8■□□□□ 0.28
CHRNA1P02708 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CHRNA1P02708 AL118508.1-201ENST00000613502 2345 ntBASIC16.8■□□□□ 0.28
CHRNA1P02708 TACC3-201ENST00000313288 2781 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CHRNA1P02708 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 ECSIT-209ENST00000591104 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNA1P02708 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHRNA1P02708 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHRNA1P02708 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.8■□□□□ 0.28
CHRNA1P02708 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC16.8■□□□□ 0.28
CHRNA1P02708 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.8■□□□□ 0.28
CHRNA1P02708 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNA1P02708 AC099552.1-201ENST00000431083 744 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNA1P02708 CALR4P-201ENST00000431943 946 ntBASIC16.8■□□□□ 0.28
CHRNA1P02708 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNA1P02708 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNA1P02708 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CHRNA1P02708 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC16.8■□□□□ 0.28
CHRNA1P02708 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHRNA1P02708 RBM8A-206ENST00000632555 751 ntAPPRIS P1 TSL 3 BASIC16.8■□□□□ 0.28
CHRNA1P02708 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CHRNA1P02708 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CHRNA1P02708 PLK2-215ENST00000617412 2792 ntTSL 5 BASIC16.8■□□□□ 0.28
CHRNA1P02708 ABCB7-201ENST00000253577 2377 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.8■□□□□ 0.28
CHRNA1P02708 PDE12-202ENST00000487257 3040 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 ZNF703-201ENST00000331569 3349 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CHRNA1P02708 FAM181A-201ENST00000267594 1816 ntTSL 2 BASIC16.8■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 119.9 ms