Protein–RNA interactions for Protein: O60264

SMARCA5, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily A member 5, humanhuman

Predicted RBP Predictions only

Length 1,052 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA5O60264 BAX-206ENST00000415969 540 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC19.25■□□□□ 0.67
SMARCA5O60264 DLX2-AS1-201ENST00000448117 950 ntTSL 5 BASIC19.25■□□□□ 0.67
SMARCA5O60264 METTL6-204ENST00000450816 1221 ntTSL 2 BASIC19.25■□□□□ 0.67
SMARCA5O60264 TIMM17B-208ENST00000495490 939 ntTSL 5 BASIC19.25■□□□□ 0.67
SMARCA5O60264 AC084125.2-203ENST00000532766 821 ntTSL 3 BASIC19.25■□□□□ 0.67
SMARCA5O60264 TAPBPL-205ENST00000544021 772 ntTSL 3 BASIC19.25■□□□□ 0.67
SMARCA5O60264 PIMREG-202ENST00000570337 891 ntTSL 5 BASIC19.25■□□□□ 0.67
SMARCA5O60264 PIMREG-203ENST00000571373 1002 ntTSL 3 BASIC19.25■□□□□ 0.67
SMARCA5O60264 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC19.25■□□□□ 0.67
SMARCA5O60264 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
SMARCA5O60264 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SMARCA5O60264 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC19.25■□□□□ 0.67
SMARCA5O60264 TSC2-222ENST00000568454 5434 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
SMARCA5O60264 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 ROPN1-203ENST00000459660 1909 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SMARCA5O60264 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
SMARCA5O60264 MED16-207ENST00000589119 2772 ntAPPRIS P2 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 HACE1-201ENST00000262903 4576 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
SMARCA5O60264 PSD-201ENST00000020673 4183 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 HYAL2-208ENST00000447092 4054 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
SMARCA5O60264 HARS-205ENST00000457527 1896 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCA5O60264 KCMF1-201ENST00000409785 7568 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCA5O60264 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCA5O60264 CEACAM16-201ENST00000405314 1583 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
SMARCA5O60264 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCA5O60264 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SMARCA5O60264 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC19.24■□□□□ 0.67
SMARCA5O60264 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCA5O60264 SPDYE19P-201ENST00000338590 713 ntBASIC19.24■□□□□ 0.67
SMARCA5O60264 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.24■□□□□ 0.67
SMARCA5O60264 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC19.24■□□□□ 0.67
SMARCA5O60264 MEIS3P1-201ENST00000495167 958 ntBASIC19.24■□□□□ 0.67
SMARCA5O60264 SERBP1P5-201ENST00000510079 1181 ntBASIC19.24■□□□□ 0.67
SMARCA5O60264 GPX4-206ENST00000588919 803 ntTSL 2 BASIC19.24■□□□□ 0.67
SMARCA5O60264 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCA5O60264 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC19.24■□□□□ 0.67
SMARCA5O60264 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCA5O60264 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCA5O60264 POLL-217ENST00000628479 1953 ntTSL 5 BASIC19.24■□□□□ 0.67
SMARCA5O60264 LTA-214ENST00000454783 1507 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
SMARCA5O60264 UPF3B-202ENST00000345865 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCA5O60264 AL359258.3-201ENST00000622910 2331 ntBASIC19.24■□□□□ 0.67
SMARCA5O60264 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SMARCA5O60264 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCA5O60264 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC19.24■□□□□ 0.67
SMARCA5O60264 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
SMARCA5O60264 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
SMARCA5O60264 LINC01270-201ENST00000371639 2281 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCA5O60264 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC19.23■□□□□ 0.67
SMARCA5O60264 AC138969.3-201ENST00000546612 1459 ntBASIC19.23■□□□□ 0.67
SMARCA5O60264 AC138932.2-201ENST00000548268 1459 ntBASIC19.23■□□□□ 0.67
SMARCA5O60264 AC126755.4-201ENST00000549796 1459 ntBASIC19.23■□□□□ 0.67
SMARCA5O60264 CCAR2-202ENST00000389279 3980 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 TLL1-204ENST00000507499 4818 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC19.23■□□□□ 0.67
SMARCA5O60264 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC19.23■□□□□ 0.67
SMARCA5O60264 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 COX11-201ENST00000299335 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCA5O60264 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC19.23■□□□□ 0.67
SMARCA5O60264 BCRP1-201ENST00000444246 691 ntBASIC19.23■□□□□ 0.67
SMARCA5O60264 FBXO4-206ENST00000509134 1284 ntTSL 5 BASIC19.23■□□□□ 0.67
SMARCA5O60264 DOC2GP-202ENST00000514950 1163 ntBASIC19.23■□□□□ 0.67
SMARCA5O60264 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCA5O60264 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC19.23■□□□□ 0.67
SMARCA5O60264 HCFC1R1-203ENST00000572355 610 ntTSL 3 BASIC19.23■□□□□ 0.67
SMARCA5O60264 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SMARCA5O60264 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.23■□□□□ 0.67
SMARCA5O60264 RDM1-220ENST00000616596 1032 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 RDM1-228ENST00000620284 1177 ntAPPRIS P3 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.23■□□□□ 0.67
SMARCA5O60264 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC19.23■□□□□ 0.67
SMARCA5O60264 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC19.23■□□□□ 0.67
SMARCA5O60264 COLQ-206ENST00000603808 1668 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SMARCA5O60264 WNK1-206ENST00000535572 9886 ntAPPRIS ALT2 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SMARCA5O60264 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC19.23■□□□□ 0.67
SMARCA5O60264 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 SH2D6-202ENST00000389938 1975 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
SMARCA5O60264 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCA5O60264 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SMARCA5O60264 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
SMARCA5O60264 KRT71-201ENST00000267119 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCA5O60264 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCA5O60264 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
SMARCA5O60264 AC068418.2-201ENST00000577309 3703 ntBASIC19.22■□□□□ 0.67
SMARCA5O60264 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC19.22■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 66 ms