Protein–RNA interactions for Protein: A6NE82

MBD3L3, Putative methyl-CpG-binding domain protein 3-like 3, humanhuman

Predicted RBP Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3L3A6NE82 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 EIF1B-AS1-201ENST00000625390 1958 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 PAX3-206ENST00000392070 2258 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 CDKN1A-203ENST00000405375 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 DMAC2-202ENST00000301183 1134 ntTSL 2 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 HDAC8-209ENST00000373589 1740 ntTSL 2 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 AC104457.1-201ENST00000401024 814 ntBASIC13.6□□□□□ -0.23
MBD3L3A6NE82 AL355483.2-201ENST00000421637 675 ntTSL 3 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 AC128709.2-201ENST00000438408 558 ntTSL 4 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 DERL2-202ENST00000570848 657 ntTSL 5 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 RN7SL560P-201ENST00000577943 264 ntBASIC13.6□□□□□ -0.23
MBD3L3A6NE82 MIR4538-201ENST00000581377 78 ntBASIC13.6□□□□□ -0.23
MBD3L3A6NE82 AC009542.2-202ENST00000619004 1067 ntBASIC13.6□□□□□ -0.23
MBD3L3A6NE82 MIR6869-201ENST00000619434 62 ntBASIC13.6□□□□□ -0.23
MBD3L3A6NE82 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 AL603764.1-201ENST00000636452 321 ntBASIC13.6□□□□□ -0.23
MBD3L3A6NE82 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 AP005117.1-202ENST00000581724 1908 ntBASIC13.6□□□□□ -0.23
MBD3L3A6NE82 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 MLLT6-210ENST00000620609 2714 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 PDXK-202ENST00000327574 2583 ntTSL 2 BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 AP003680.1-201ENST00000598970 3660 ntBASIC13.6□□□□□ -0.23
MBD3L3A6NE82 AL391005.1-201ENST00000623953 2435 ntBASIC13.6□□□□□ -0.23
MBD3L3A6NE82 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
MBD3L3A6NE82 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 AMOTL2-211ENST00000513145 2653 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 SYTL2-215ENST00000527523 3049 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 SLC35A1-202ENST00000369556 1720 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 PGAP2-205ENST00000396993 1566 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 SIGLEC12-203ENST00000598614 1434 ntTSL 5 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 LSM5-207ENST00000410044 687 ntTSL 3 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 OLR1-203ENST00000432556 950 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 FAM25G-201ENST00000452267 345 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 PFN1P12-201ENST00000455938 534 ntBASIC13.59□□□□□ -0.23
MBD3L3A6NE82 AL590640.2-201ENST00000457038 527 ntBASIC13.59□□□□□ -0.23
MBD3L3A6NE82 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 AC080188.2-201ENST00000508985 552 ntTSL 4 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 SNHG9-201ENST00000531523 275 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 AP000808.2-201ENST00000542410 569 ntTSL 4 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 AC007569.1-201ENST00000550306 600 ntTSL 3 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 C20orf202-201ENST00000400633 1604 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 CPA5-202ENST00000431780 1803 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 TPD52L2-201ENST00000217121 2362 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 STK24-203ENST00000397517 4578 ntTSL 2 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
MBD3L3A6NE82 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 73.6 ms