Protein–RNA interactions for Protein: A2RUB6

CCDC66, Coiled-coil domain-containing protein 66, humanhuman

Predictions only

Length 948 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66A2RUB6 TAOK2-204ENST00000543033 4072 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 WDR24-201ENST00000248142 2763 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 TMTC1-207ENST00000552618 3915 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 ZNF663P-201ENST00000400371 2722 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 INPP5J-204ENST00000402238 1564 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 AC092474.2-201ENST00000424288 719 ntBASIC17.04■□□□□ 0.32
CCDC66A2RUB6 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 AC010507.1-201ENST00000633895 436 ntBASIC17.04■□□□□ 0.32
CCDC66A2RUB6 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 KLF11-205ENST00000535335 4033 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 AC009053.1-201ENST00000566802 2320 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 SUN2-203ENST00000406622 2725 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 FAM53C-202ENST00000434981 1686 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 GABRD-218ENST00000640949 1684 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 CYP20A1-201ENST00000356079 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC17.04■□□□□ 0.32
CCDC66A2RUB6 TFE3-201ENST00000315869 3415 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 MEGF11-204ENST00000422354 5914 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 ZNF541-203ENST00000391901 4580 ntAPPRIS P2 TSL 5 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 PLEKHA8P1-201ENST00000256692 1839 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 TOMM40-207ENST00000592434 3415 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 CTRC-202ENST00000375949 898 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 FALEC-201ENST00000416894 566 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 HILS1-201ENST00000504307 1219 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 AC093909.1-201ENST00000504731 1122 ntBASIC17.03■□□□□ 0.32
CCDC66A2RUB6 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 KLK8-205ENST00000593490 267 ntTSL 3 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 AC116407.3-201ENST00000623905 1129 ntBASIC17.03■□□□□ 0.32
CCDC66A2RUB6 AC007064.4-201ENST00000637740 555 ntBASIC17.03■□□□□ 0.32
CCDC66A2RUB6 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 AC011477.6-201ENST00000604980 1927 ntBASIC17.03■□□□□ 0.32
CCDC66A2RUB6 NFATC4-219ENST00000555167 4364 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 PAPOLA-201ENST00000216277 4519 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 NCKAP5L-201ENST00000335999 4900 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 AC005885.1-204ENST00000637885 2885 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
CCDC66A2RUB6 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 DDX20-201ENST00000369702 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 COQ7-209ENST00000569127 2575 ntTSL 2 BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 SPDYE2B-203ENST00000507450 1742 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 SPDYE2-203ENST00000507918 1742 ntAPPRIS P2 TSL 2 BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
CCDC66A2RUB6 NDUFB9-201ENST00000276689 711 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms