Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 MICAL3-206ENST00000441493 9445 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 TP53INP1-201ENST00000342697 5638 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 AC006058.4-201ENST00000624016 1670 ntBASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 H3F3A-201ENST00000366813 1308 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 ZC2HC1C-201ENST00000238686 2249 ntTSL 5 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 AC126365.1-201ENST00000578585 1514 ntBASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.63■□□□□ 0.09
VPS9D1Q9Y2B5 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 TMA16-201ENST00000358572 1978 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 NCKIPSD-201ENST00000294129 2989 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 PNLDC1-202ENST00000392167 1816 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 AC013268.4-201ENST00000637413 2228 ntBASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 BAD-202ENST00000394531 631 ntTSL 3 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 RPL37AP1-201ENST00000412502 279 ntBASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 AL157938.2-207ENST00000415391 884 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 MTND2P9-201ENST00000422293 931 ntBASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 AC107890.1-201ENST00000422478 521 ntBASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 USP40-206ENST00000443711 628 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 RSL24D1P2-201ENST00000445584 366 ntBASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 RPL12P24-201ENST00000474907 486 ntBASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 RN7SL618P-201ENST00000477850 296 ntBASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 SLBP-205ENST00000488267 987 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 LY6E-204ENST00000519546 971 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 SLC1A4-205ENST00000531327 1217 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 BAD-207ENST00000544785 525 ntTSL 3 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 TGIF2-C20orf24-201ENST00000558530 918 ntAPPRIS P1 TSL 3 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 AC140878.1-201ENST00000565277 250 ntBASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 AC009065.5-201ENST00000565937 596 ntTSL 3 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 AP001160.2-201ENST00000596071 487 ntBASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 AC021321.1-201ENST00000607397 1113 ntBASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 AC073592.8-201ENST00000624126 511 ntBASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 RAB34-223ENST00000636154 730 ntTSL 2 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 GUCD1-204ENST00000407471 3482 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 FBLIM1-206ENST00000441801 1543 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 PHKG2-204ENST00000563588 5539 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
VPS9D1Q9Y2B5 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 STK17B-201ENST00000263955 5287 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 SHROOM4-201ENST00000289292 6261 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 ACSM1-204ENST00000520010 1894 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 STK33-217ENST00000534493 1895 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 NKIRAS1-201ENST00000388759 2335 ntAPPRIS P2 TSL 3 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 NRSN2-AS1-202ENST00000442637 762 ntTSL 3 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 AL355870.1-201ENST00000448272 454 ntTSL 3 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 FAM86GP-201ENST00000448322 971 ntBASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 AC008750.1-201ENST00000532473 492 ntTSL 3 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 CBR3-AS1-216ENST00000624883 564 ntTSL 3 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 METTL15-210ENST00000634721 1182 ntTSL 5 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 MAP7-207ENST00000616617 4326 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
VPS9D1Q9Y2B5 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 86.2 ms