Protein–RNA interactions for Protein: Q9UPQ7

PDZRN3, E3 ubiquitin-protein ligase PDZRN3, humanhuman

Predictions only

Length 1,066 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3Q9UPQ7 AC138207.8-201ENST00000579692 739 ntTSL 3 BASIC20.14■□□□□ 0.81
PDZRN3Q9UPQ7 MIR4321-201ENST00000592276 80 ntBASIC20.14■□□□□ 0.81
PDZRN3Q9UPQ7 KLK15-203ENST00000596931 692 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDZRN3Q9UPQ7 NFATC1-207ENST00000545796 3558 ntTSL 2 BASIC20.14■□□□□ 0.81
PDZRN3Q9UPQ7 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDZRN3Q9UPQ7 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC20.14■□□□□ 0.81
PDZRN3Q9UPQ7 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDZRN3Q9UPQ7 TFAP2C-201ENST00000201031 2866 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDZRN3Q9UPQ7 MIEF2-203ENST00000395704 2879 ntTSL 2 BASIC20.14■□□□□ 0.81
PDZRN3Q9UPQ7 UBE2D1-204ENST00000615793 2621 ntTSL 2 BASIC20.14■□□□□ 0.81
PDZRN3Q9UPQ7 CRY2-201ENST00000417225 2053 ntTSL 2 BASIC20.14■□□□□ 0.81
PDZRN3Q9UPQ7 ABTB1-206ENST00000468137 2065 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
PDZRN3Q9UPQ7 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC20.14■□□□□ 0.81
PDZRN3Q9UPQ7 AC020658.6-201ENST00000623564 1870 ntBASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 APOC3-202ENST00000375345 604 ntTSL 5 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 GALT-202ENST00000450095 1280 ntTSL 2 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 AC245100.5-201ENST00000452108 331 ntBASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 CROCCP4-201ENST00000457096 498 ntBASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 AL161908.2-201ENST00000457964 394 ntTSL 2 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 BANK1-207ENST00000508653 2115 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 MFF-223ENST00000524634 647 ntTSL 2 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 AL583810.1-201ENST00000553344 1045 ntBASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 PAM16-204ENST00000571941 674 ntTSL 3 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 SNAP25-AS1-208ENST00000605592 556 ntTSL 5 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 MIR6787-201ENST00000616675 61 ntBASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 MIR6869-201ENST00000619434 62 ntBASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 AC134407.2-201ENST00000625089 1978 ntBASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 ANKRD26P3-201ENST00000454044 2748 ntBASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 C2orf54-202ENST00000388934 1911 ntAPPRIS P4 TSL 2 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 EIF2B3-210ENST00000620860 1923 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 PARD6G-201ENST00000353265 3868 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 FUT8-213ENST00000557164 2269 ntTSL 2 BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
PDZRN3Q9UPQ7 IDH3G-204ENST00000427365 1526 ntTSL 5 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 PIP4K2C-207ENST00000550465 1532 ntTSL 2 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 STAT6-225ENST00000640254 2037 ntTSL 5 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 PUF60-208ENST00000526683 2412 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 GSN-206ENST00000394353 2311 ntTSL 2 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 AL442647.2-201ENST00000429864 857 ntBASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 AL162726.2-201ENST00000438986 1017 ntBASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 TRIML1-201ENST00000332517 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 ZNF19-208ENST00000565637 2612 ntTSL 2 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 PSMC5-209ENST00000580864 1552 ntTSL 5 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 GPR61-206ENST00000616874 2459 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 AC011477.6-201ENST00000604980 1927 ntBASIC20.12■□□□□ 0.81
PDZRN3Q9UPQ7 CES4A-207ENST00000540947 2284 ntAPPRIS P2 TSL 2 BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 UBA6-AS1-201ENST00000498917 1445 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 PITPNM1-201ENST00000356404 4225 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 AC023824.1-201ENST00000562945 2975 ntBASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 FBXO44-204ENST00000376762 1734 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
PDZRN3Q9UPQ7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 48.1 ms