Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR9Q9NR96 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR9Q9NR96 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR9Q9NR96 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TLR9Q9NR96 CYMP-AS1-201ENST00000457402 2351 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TLR9Q9NR96 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 ADAM6-201ENST00000606026 1843 ntTSL 2 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 SYBU-231ENST00000533065 2645 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 CMA1-202ENST00000250378 937 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR9Q9NR96 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 PFDN6-202ENST00000374607 598 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 PFDN6-203ENST00000374610 521 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 MIR648-201ENST00000385046 94 ntBASIC16.48■□□□□ 0.23
TLR9Q9NR96 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR9Q9NR96 APOA2-204ENST00000464492 530 ntTSL 3 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 AC022903.1-201ENST00000579327 469 ntTSL 2 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 CYGB-203ENST00000589145 788 ntTSL 3 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR9Q9NR96 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TLR9Q9NR96 NDRG2-211ENST00000397858 2054 ntAPPRIS P4 TSL 5 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 AC011477.6-201ENST00000604980 1927 ntBASIC16.48■□□□□ 0.23
TLR9Q9NR96 PRR19-201ENST00000341747 1530 ntAPPRIS P2 TSL 5 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 AL354989.2-201ENST00000435838 1540 ntBASIC16.48■□□□□ 0.23
TLR9Q9NR96 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR9Q9NR96 SPATA21-205ENST00000540400 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
TLR9Q9NR96 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
TLR9Q9NR96 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TLR9Q9NR96 DMAC2-204ENST00000438807 1454 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
TLR9Q9NR96 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TLR9Q9NR96 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TLR9Q9NR96 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC16.47■□□□□ 0.23
TLR9Q9NR96 SNHG20-204ENST00000566583 1338 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TLR9Q9NR96 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TLR9Q9NR96 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
TLR9Q9NR96 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TLR9Q9NR96 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC16.47■□□□□ 0.23
TLR9Q9NR96 PSEN2-203ENST00000422240 1947 ntAPPRIS ALT1 TSL 2 BASIC16.47■□□□□ 0.23
TLR9Q9NR96 C17orf74-201ENST00000333870 1651 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TLR9Q9NR96 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC16.47■□□□□ 0.23
TLR9Q9NR96 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TLR9Q9NR96 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TLR9Q9NR96 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC16.47■□□□□ 0.23
TLR9Q9NR96 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC16.47■□□□□ 0.23
TLR9Q9NR96 KLF2P2-201ENST00000416807 1039 ntBASIC16.47■□□□□ 0.23
TLR9Q9NR96 AL451065.1-201ENST00000428958 238 ntTSL 5 BASIC16.47■□□□□ 0.23
TLR9Q9NR96 FNTAP2-201ENST00000430308 634 ntBASIC16.47■□□□□ 0.23
TLR9Q9NR96 AL450003.2-201ENST00000450445 428 ntTSL 5 BASIC16.47■□□□□ 0.23
TLR9Q9NR96 MPRIPP1-201ENST00000452433 1089 ntBASIC16.47■□□□□ 0.23
TLR9Q9NR96 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
TLR9Q9NR96 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC16.47■□□□□ 0.23
TLR9Q9NR96 UBL5-208ENST00000593087 320 ntTSL 3 BASIC16.47■□□□□ 0.23
TLR9Q9NR96 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.47■□□□□ 0.23
TLR9Q9NR96 ECM1P1-201ENST00000604092 1279 ntBASIC16.47■□□□□ 0.23
TLR9Q9NR96 AL096828.3-201ENST00000615354 462 ntBASIC16.47■□□□□ 0.23
TLR9Q9NR96 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
TLR9Q9NR96 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TLR9Q9NR96 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TLR9Q9NR96 MUTYH-209ENST00000448481 1706 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
TLR9Q9NR96 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
TLR9Q9NR96 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.47■□□□□ 0.23
TLR9Q9NR96 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TLR9Q9NR96 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 MAP4K3-201ENST00000263881 4362 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TLR9Q9NR96 RPN1-201ENST00000296255 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
TLR9Q9NR96 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 AMT-233ENST00000636522 1620 ntTSL 2 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TLR9Q9NR96 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC16.46■□□□□ 0.23
TLR9Q9NR96 TPM3P8-201ENST00000330554 643 ntBASIC16.46■□□□□ 0.23
TLR9Q9NR96 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 RNU1-114P-201ENST00000365297 166 ntBASIC16.46■□□□□ 0.23
TLR9Q9NR96 HNRNPA1P32-201ENST00000396326 963 ntBASIC16.46■□□□□ 0.23
TLR9Q9NR96 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 CR589904.1-201ENST00000437830 732 ntTSL 5 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 AC114812.1-204ENST00000449669 728 ntBASIC16.46■□□□□ 0.23
TLR9Q9NR96 AC005077.2-201ENST00000449786 690 ntBASIC16.46■□□□□ 0.23
TLR9Q9NR96 BX284668.4-201ENST00000453917 508 ntBASIC16.46■□□□□ 0.23
TLR9Q9NR96 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 TP53AIP1-205ENST00000531399 806 ntAPPRIS P3 TSL 1 (best) BASIC16.46■□□□□ 0.23
TLR9Q9NR96 SSTR5-AS1-201ENST00000565992 575 ntTSL 4 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 ZSCAN32-210ENST00000573830 668 ntTSL 3 BASIC16.46■□□□□ 0.23
TLR9Q9NR96 RN7SL48P-201ENST00000579283 293 ntBASIC16.46■□□□□ 0.23
TLR9Q9NR96 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
TLR9Q9NR96 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.46■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms