Protein–RNA interactions for Protein: Q9BU40

CHRDL1, Chordin-like protein 1, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL1Q9BU40 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 LINC01101-201ENST00000622953 1884 ntBASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 EPS8L2-218ENST00000530636 2469 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 WARS-232ENST00000556645 2508 ntTSL 5 BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 CCDC88A-204ENST00000413716 9586 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
CHRDL1Q9BU40 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 SSR4P1-203ENST00000599569 2260 ntBASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 WDR45-202ENST00000356463 1688 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 PPP1R15A-201ENST00000200453 2378 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 FKBP8-201ENST00000222308 1710 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 LIMS2-217ENST00000545738 1730 ntTSL 5 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 FSTL4-201ENST00000265342 5419 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 KNSTRN-202ENST00000416151 1899 ntTSL 3 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 AC020658.6-201ENST00000623564 1870 ntBASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 AC134407.2-201ENST00000625089 1978 ntBASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 DLX4-201ENST00000240306 2034 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 CBR1-202ENST00000399191 838 ntTSL 3 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 PP14571-201ENST00000404327 934 ntTSL 2 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 CEND1P1-201ENST00000451006 455 ntBASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 SLC50A1-209ENST00000484157 886 ntTSL 3 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 RNA5SP410-201ENST00000516285 106 ntBASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 AC061975.2-201ENST00000581722 295 ntBASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 AC024267.1-201ENST00000582320 895 ntBASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 AC008761.1-201ENST00000595363 217 ntTSL 5 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 PMS1-221ENST00000624204 3417 ntTSL 2 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 PEG13-201ENST00000631594 5667 ntBASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 MSI2-204ENST00000442934 1624 ntTSL 2 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 DRG1-201ENST00000331457 1746 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 Z98749.3-201ENST00000400206 1770 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 AC012507.2-203ENST00000415628 1765 ntTSL 3 BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 TFB2M-201ENST00000366514 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
CHRDL1Q9BU40 ELL2P1-201ENST00000413990 1906 ntBASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 DAAM2-201ENST00000274867 6194 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 SHISA2-201ENST00000319420 2860 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 TK2-203ENST00000451102 3738 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 MIR346-201ENST00000362234 95 ntBASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 AC005829.1-201ENST00000570002 483 ntBASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC12.5□□□□□ -0.41
CHRDL1Q9BU40 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC12.5□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms