Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 AL139010.1-201ENST00000454878 894 ntBASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 TRAPPC6A-204ENST00000588062 695 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 SRD5A3P1-201ENST00000603021 949 ntBASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 MIR6752-201ENST00000618442 71 ntBASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 SERPINF2-203ENST00000450523 1462 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 LINC00221-202ENST00000619530 1499 ntTSL 2 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 TUBG2-201ENST00000251412 1761 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 ATP6AP2-226ENST00000637526 1862 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 C14orf93-207ENST00000397382 1986 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 SYBU-219ENST00000528647 2995 ntAPPRIS P4 TSL 2 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 CRLS1-203ENST00000452938 3859 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 UNC5C-203ENST00000506749 2220 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 LCK-206ENST00000373564 2137 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 C7orf43-207ENST00000457641 2005 ntTSL 5 BASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 AC011477.6-201ENST00000604980 1927 ntBASIC16.45■□□□□ 0.22
CCDC33Q8N5R6 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 SLC7A15P-201ENST00000424028 1363 ntBASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 DKKL1-201ENST00000221498 1222 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 PXMP4-202ENST00000344022 989 ntTSL 2 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 AL589987.1-201ENST00000453380 819 ntBASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 SDHAP3-202ENST00000515467 728 ntBASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 TPRX2P-201ENST00000535362 881 ntBASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 TMEM205-208ENST00000587948 688 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 IFT20-216ENST00000588477 774 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 TMEM205-211ENST00000589555 788 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 AP000704.1-201ENST00000637940 2182 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC16.44■□□□□ 0.22
CCDC33Q8N5R6 NFIC-202ENST00000395111 1755 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 TBC1D17-202ENST00000535102 2025 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 CALCB-202ENST00000523376 2258 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 KIAA2026-202ENST00000399933 6988 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 SNHG15-202ENST00000577700 3116 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 WDR38-201ENST00000373574 1252 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 MXI1-205ENST00000393134 889 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 AC011495.1-201ENST00000498085 584 ntBASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 ZNF586-205ENST00000598885 578 ntTSL 4 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 MIR6069-201ENST00000620069 79 ntBASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 AC013268.4-201ENST00000637413 2228 ntBASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
CCDC33Q8N5R6 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 38.4 ms