Protein–RNA interactions for Protein: Q8N5M1

ATPAF2, ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

Predictions only

Length 289 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2Q8N5M1 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 NME2-201ENST00000393183 568 ntTSL 2 BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 HNRNPA1P40-201ENST00000426371 1278 ntBASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 FAM8A3P-201ENST00000427218 844 ntBASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 AC092337.1-201ENST00000568699 1129 ntBASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 AC004840.1-201ENST00000636359 365 ntBASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 UBE2J1-201ENST00000435041 4290 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 PRRG1-203ENST00000463135 1663 ntTSL 2 BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 SNHG22-201ENST00000589499 1615 ntTSL 2 BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 WDR6-222ENST00000615452 1949 ntTSL 5 BASIC16.04■□□□□ 0.16
ATPAF2Q8N5M1 SPIB-201ENST00000270632 1443 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 TMEM139-205ENST00000410004 2114 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 LTF-203ENST00000426532 2494 ntTSL 2 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 SHF-202ENST00000458022 1163 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 KRT18P43-201ENST00000469825 1281 ntBASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 SPDYE18-201ENST00000510091 1050 ntBASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 AC104794.3-201ENST00000566840 1248 ntBASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 GABARAP-205ENST00000573928 476 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 AC015910.1-201ENST00000579400 975 ntBASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 AC027601.1-201ENST00000575922 4506 ntTSL 2 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 SEC14L4-204ENST00000381982 1603 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 THEMIS2-202ENST00000373921 2687 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 AP001122.1-202ENST00000501648 1916 ntTSL 2 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 SPRY1-207ENST00000610581 2608 ntAPPRIS P1 TSL 3 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 DDTL-201ENST00000215770 1545 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 SLC22A6-204ENST00000458333 1521 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 PHYH-203ENST00000396920 1829 ntTSL 5 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 GATA4-201ENST00000335135 3414 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 TIRAP-203ENST00000392680 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
ATPAF2Q8N5M1 ACOX3-202ENST00000413009 2374 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 KLK3-202ENST00000360617 1664 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 TK1-203ENST00000588734 1681 ntTSL 2 BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 ZSWIM8-221ENST00000604729 6075 ntAPPRIS ALT1 TSL 5 BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 MIR600HG-201ENST00000449175 5984 ntBASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 ZBTB47-202ENST00000505904 2456 ntTSL 5 BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 AL133267.1-201ENST00000398220 340 ntBASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 MRPS18AP1-201ENST00000414458 589 ntBASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 TOMM22P5-201ENST00000416399 439 ntBASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.02■□□□□ 0.16
ATPAF2Q8N5M1 ERO1B-202ENST00000354619 4567 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATPAF2Q8N5M1 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.02■□□□□ 0.15
ATPAF2Q8N5M1 MBD1-207ENST00000398488 1512 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATPAF2Q8N5M1 MKS1-204ENST00000537529 2083 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
ATPAF2Q8N5M1 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATPAF2Q8N5M1 ANKMY2-201ENST00000306999 2555 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
ATPAF2Q8N5M1 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.02■□□□□ 0.15
ATPAF2Q8N5M1 C18orf15-201ENST00000623680 2534 ntBASIC16.02■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms