Protein–RNA interactions for Protein: Q86TL0

ATG4D, Cysteine protease ATG4D, humanhuman

Predicted RBP Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4DQ86TL0 XAGE1A-203ENST00000375602 614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 XAGE1B-203ENST00000375616 614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 PSMB8-203ENST00000395339 1025 ntTSL 3 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 MRPS18AP1-201ENST00000414458 589 ntBASIC14.18□□□□□ -0.14
ATG4DQ86TL0 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 TOMM22P5-201ENST00000416399 439 ntBASIC14.18□□□□□ -0.14
ATG4DQ86TL0 TSSK5P-201ENST00000423978 907 ntBASIC14.18□□□□□ -0.14
ATG4DQ86TL0 U52111.1-201ENST00000434284 914 ntTSL 3 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 AC004890.2-204ENST00000481968 304 ntBASIC14.18□□□□□ -0.14
ATG4DQ86TL0 AC092910.3-201ENST00000484076 969 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 AC044860.1-202ENST00000559481 777 ntBASIC14.18□□□□□ -0.14
ATG4DQ86TL0 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 SFT2D2-204ENST00000630869 1073 ntTSL 4 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 C11orf53-203ENST00000637637 1049 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 MEGF10-206ENST00000508365 2365 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
ATG4DQ86TL0 DMTN-209ENST00000517600 1569 ntTSL 5 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 AC087164.1-202ENST00000583062 2158 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 SH3BP4-203ENST00000409212 5231 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 TBC1D1-219ENST00000615497 2383 ntTSL 2 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 RGPD8-201ENST00000302558 5576 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 ZNF7-218ENST00000544249 2125 ntTSL 2 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 KIAA1217-206ENST00000376462 6123 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 SIGLEC8-203ENST00000430817 1528 ntTSL 2 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 LRRC6-213ENST00000620350 1878 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 PCED1B-202ENST00000546455 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 TM4SF19-201ENST00000273695 1022 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 C14orf178-201ENST00000355883 642 ntAPPRIS P3 TSL 5 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 GSTO1-201ENST00000369710 900 ntTSL 2 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 NUDT1-205ENST00000397048 783 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 HNRNPA3P1-201ENST00000401429 1139 ntBASIC14.17□□□□□ -0.14
ATG4DQ86TL0 AC091729.2-201ENST00000415656 302 ntTSL 3 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 AC093702.1-201ENST00000423433 367 ntTSL 3 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 AC241585.1-201ENST00000433527 519 ntBASIC14.17□□□□□ -0.14
ATG4DQ86TL0 AL669970.3-201ENST00000435284 428 ntTSL 3 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 HNRNPA3P5-201ENST00000455201 833 ntBASIC14.17□□□□□ -0.14
ATG4DQ86TL0 AL512638.1-201ENST00000457493 794 ntBASIC14.17□□□□□ -0.14
ATG4DQ86TL0 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 FBN2-205ENST00000508989 4987 ntTSL 2 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 H6PD-201ENST00000377403 9146 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 TNRC18P2-201ENST00000417666 2714 ntBASIC14.17□□□□□ -0.14
ATG4DQ86TL0 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
ATG4DQ86TL0 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 TCAF2P1-201ENST00000291129 2421 ntBASIC14.16□□□□□ -0.14
ATG4DQ86TL0 AHR-201ENST00000242057 6276 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 ODF2-202ENST00000372791 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 ASB10-201ENST00000275838 1820 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 DNAAF5-201ENST00000297440 3410 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 MAP4K5-201ENST00000013125 4354 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
ATG4DQ86TL0 SYT5-207ENST00000590851 3619 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 85.5 ms