Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
SSR1P43307 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC16.73■□□□□ 0.27
SSR1P43307 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SSR1P43307 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC16.73■□□□□ 0.27
SSR1P43307 RPS8P6-201ENST00000426177 609 ntBASIC16.73■□□□□ 0.27
SSR1P43307 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.73■□□□□ 0.27
SSR1P43307 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC16.73■□□□□ 0.27
SSR1P43307 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC16.73■□□□□ 0.27
SSR1P43307 SPINK2-203ENST00000506738 763 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SSR1P43307 DCUN1D5-209ENST00000531543 1030 ntTSL 5 BASIC16.73■□□□□ 0.27
SSR1P43307 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC16.73■□□□□ 0.27
SSR1P43307 NAA38-207ENST00000576861 556 ntTSL 3 BASIC16.73■□□□□ 0.27
SSR1P43307 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.73■□□□□ 0.27
SSR1P43307 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC16.73■□□□□ 0.27
SSR1P43307 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC16.73■□□□□ 0.27
SSR1P43307 AC010327.4-202ENST00000591484 748 ntBASIC16.73■□□□□ 0.27
SSR1P43307 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.73■□□□□ 0.27
SSR1P43307 AC022145.2-201ENST00000598203 171 ntBASIC16.73■□□□□ 0.27
SSR1P43307 GAK-222ENST00000618573 1248 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 HOTTIP_1.1-201ENST00000620415 57 ntBASIC16.73■□□□□ 0.27
SSR1P43307 AC105339.1-204ENST00000636249 355 ntBASIC16.73■□□□□ 0.27
SSR1P43307 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC16.73■□□□□ 0.27
SSR1P43307 FOLH1-202ENST00000340334 2697 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SSR1P43307 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC16.73■□□□□ 0.27
SSR1P43307 ZNF618-207ENST00000615615 9289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 EOMES-201ENST00000295743 3386 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 TCTN1-202ENST00000397655 1879 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 LOX-206ENST00000639739 1626 ntTSL 5 BASIC16.73■□□□□ 0.27
SSR1P43307 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SSR1P43307 FLNC-201ENST00000325888 9188 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 EIF4G1-201ENST00000342981 5667 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SSR1P43307 ASPG-206ENST00000551177 4851 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SSR1P43307 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC16.73■□□□□ 0.27
SSR1P43307 RET-201ENST00000340058 4149 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 PRKACG-201ENST00000377276 1585 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SSR1P43307 CORO1A-208ENST00000565497 1348 ntTSL 5 BASIC16.72■□□□□ 0.27
SSR1P43307 KCNG4-201ENST00000308251 5179 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SSR1P43307 KCNMA1-219ENST00000480683 2963 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 PTOV1-219ENST00000601638 1413 ntTSL 5 BASIC16.72■□□□□ 0.27
SSR1P43307 RAB18-207ENST00000535776 4811 ntTSL 2 BASIC16.72■□□□□ 0.27
SSR1P43307 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 PATZ1-203ENST00000351933 3638 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 POU2F2-207ENST00000529067 2657 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 MGME1-203ENST00000377710 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 MAPKAPK5-207ENST00000551404 1630 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
SSR1P43307 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC16.72■□□□□ 0.27
SSR1P43307 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC16.72■□□□□ 0.27
SSR1P43307 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SSR1P43307 AL391335.1-201ENST00000504583 535 ntTSL 4 BASIC16.72■□□□□ 0.27
SSR1P43307 TMEM5-AS1-201ENST00000546214 563 ntTSL 4 BASIC16.72■□□□□ 0.27
SSR1P43307 CSRP2-202ENST00000546966 754 ntAPPRIS P1 TSL 3 BASIC16.72■□□□□ 0.27
SSR1P43307 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.72■□□□□ 0.27
SSR1P43307 RARRES2P9-201ENST00000565168 469 ntBASIC16.72■□□□□ 0.27
SSR1P43307 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC16.72■□□□□ 0.27
SSR1P43307 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC16.72■□□□□ 0.27
SSR1P43307 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 NDRG2-207ENST00000397847 2084 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 STK40-201ENST00000359297 4837 ntTSL 2 BASIC16.72■□□□□ 0.27
SSR1P43307 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 TOM1-206ENST00000425375 2252 ntTSL 2 BASIC16.72■□□□□ 0.27
SSR1P43307 AL163636.2-201ENST00000553909 1498 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SSR1P43307 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC16.72■□□□□ 0.27
SSR1P43307 AGBL3-202ENST00000435976 2495 ntTSL 5 BASIC16.72■□□□□ 0.27
SSR1P43307 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC16.72■□□□□ 0.27
SSR1P43307 CYP4F24P-201ENST00000586049 1580 ntBASIC16.72■□□□□ 0.27
SSR1P43307 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SSR1P43307 ST20-AS1-201ENST00000560255 4223 ntBASIC16.72■□□□□ 0.27
SSR1P43307 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 BUD13-202ENST00000375445 1793 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
SSR1P43307 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
SSR1P43307 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 UMODL1-203ENST00000400424 5516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 CYP4F2-202ENST00000221700 2407 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.71■□□□□ 0.27
SSR1P43307 SPPL2A-201ENST00000261854 7372 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 ALOX15B-204ENST00000572022 2396 ntTSL 2 BASIC16.71■□□□□ 0.27
SSR1P43307 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.71■□□□□ 0.27
SSR1P43307 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC16.71■□□□□ 0.27
SSR1P43307 TNNT1-201ENST00000291901 967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms